This commit is contained in:
Lloyd McKenzie 2020-06-27 11:11:11 -06:00
commit 886154b3cd
13 changed files with 12603 additions and 9734 deletions

View File

@ -3,7 +3,7 @@ SET publisher_jar=org.hl7.fhir.publisher.jar
SET input_cache_path=%CD%\input-cache
ECHO Checking internet connection...
PING tx.fhir.org -n 1 -w 1000 | FINDSTR TTL && GOTO isonline
PING tx.fhir.org -4 -n 1 -w 1000 | FINDSTR TTL && GOTO isonline
ECHO We're offline...
SET txoption=-tx n/a
GOTO igpublish
@ -24,4 +24,4 @@ IF EXIST "%input_cache_path%\%publisher_jar%" (
ECHO IG Publisher NOT FOUND in input-cache or parent folder. Please run _updatePublisher. Aborting...
)
PAUSE
PAUSE

View File

@ -19,7 +19,7 @@ IF "%~1"=="/f" SET skipPrompts=true
ECHO.
ECHO Checking internet connection...
PING tx.fhir.org -n 1 -w 1000 | FINDSTR TTL && GOTO isonline
PING tx.fhir.org -4 -n 1 -w 1000 | FINDSTR TTL && GOTO isonline
ECHO We're offline, nothing to do...
GOTO end
@ -215,4 +215,4 @@ start copy /y "_updatePublisher.new.bat" "_updatePublisher.bat" ^&^& del "_updat
IF "%skipPrompts%"=="true" (
PAUSE
}
}

File diff suppressed because it is too large Load Diff

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@ -1,4 +1,4 @@
-------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------
{"code" : {
"code" : "http://hl7.org/fhirpath/System.String"
}, "valueSet" :{
@ -11,10 +11,74 @@
"system" : "http://hl7.org/fhir/resource-types"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "",
"severity" : "error",
"error" : "The code system \"\" is not known (encountered paired with code = \"http://hl7.org/fhirpath/System.String\"); The code provided (#http://hl7.org/fhirpath/System.String) is not valid in the value set FHIRDefinedType"
}
-------------------------------------------------------------------------------------
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "",
"severity" : "error",
"error" : "The code system \"\" is not known (encountered paired with code = \"http://hl7.org/fhirpath/System.String\"); The code provided (#http://hl7.org/fhirpath/System.String) is not valid in the value set FHIRDefinedType"
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "text/cql"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:ietf:bcp:13"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "text/cql",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "application/elm+xml"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:ietf:bcp:13"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "application/elm+xml",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "application/pdf"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:ietf:bcp:13"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "application/pdf",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "application/elm+json"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:ietf:bcp:13"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "application/elm+json",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------

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@ -1,33 +1,43 @@
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"filter" : [{
"property" : "class",
"op" : "=",
"value" : "region"
}]
}]
}
}, "lang":"null", "useServer":"true", "useClient":"false", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "",
"severity" : "error",
"error" : "Not done yet @ TAreaCodeServices.Close"
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}, "valueSet" :null, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "World",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"filter" : [{
"property" : "class",
"op" : "=",
"value" : "region"
}]
}]
}
}, "lang":"null", "useServer":"true", "useClient":"false", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "",
"severity" : "error",
"error" : "Not done yet @ TAreaCodeServices.Close"
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}, "valueSet" :null, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "World",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}, "valueSet" :null, "lang":"en-US", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "World",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------

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@ -1,31 +1,31 @@
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://loinc.org",
"code" : "85354-9"
}, "valueSet" :null, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "Blood pressure panel with all children optional",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://loinc.org",
"code" : "8480-6"
}, "valueSet" :null, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "Systolic blood pressure",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://loinc.org",
"code" : "8462-4"
}, "valueSet" :null, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "Diastolic blood pressure",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://loinc.org",
"code" : "85354-9"
}, "valueSet" :null, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "Blood pressure panel with all children optional",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://loinc.org",
"code" : "8480-6"
}, "valueSet" :null, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "Systolic blood pressure",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://loinc.org",
"code" : "8462-4"
}, "valueSet" :null, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "Diastolic blood pressure",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------

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@ -1 +1 @@
1.0.308
1.0.329

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@ -0,0 +1,17 @@
{
"options":[
"EnableAnnotations",
"EnableLocators",
"DisableListDemotion",
"DisableListPromotion"
],
"formats":[
"XML",
"JXSON"
],
"validateUnits":true,
"verifyOnly":false,
"errorLevel":"Info",
"signatureLevel":"None"
}

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@ -1,14 +1,24 @@
{
"resourceType" : "Library",
"id": "example",
"url" : "http://somewhere.org/fhir/uv/myig/Library/example",
"version" : "1.0.0",
"name": "example",
"title": "Example CQL Library",
"status" : "draft",
"experimental": true,
"type" : {
"coding" : [{
"system" : "http://terminology.hl7.org/CodeSystem/library-type",
"code" : "logic-library"
}]
},
"subject": {
"coding": [{
"system": "hl7.org/fhir/resource-types",
"code": "Patient"
}]
},
"content" : [{
"id" : "ig-loader-example.cql"
}]

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@ -38,11 +38,6 @@
<license value="CC0-1.0"/>
<!-- This is whatever FHIR version(s) the IG artifacts are targeting (not the version of this file, which should always be 'current release') -->
<fhirVersion value="4.0.1"/>
<!-- <dependsOn>
<uri value="http://somethign"/>
<packageId value="de.basisprofil.r4"/>
<version value="0.9.2"/>
</dependsOn> -->
<definition>
<!-- You don't need to define any groupings. The IGPublisher will define them for you. You only need to do so if your IG is 'special' and it's
inappropriate to use the defaults. Feel free to provide feedback about the defaults... -->
@ -67,9 +62,9 @@
</resource>
<resource>
<reference>
<reference value="Bundle/h1"/>
<reference value="ValueSet/valueset-no-codesystem"/>
</reference>
<name value="History"/>
<name value="Value set for no code system"/>
</resource>
<!-- <resource>
<reference>
@ -131,6 +126,10 @@
<code value="path-binary"/>
<value value="input\cql"/>
</parameter>
<parameter>
<code value="path-liquid"/>
<value value="templates\liquid"/>
</parameter>
<!-- Uncomment one or more of these if you want to limit which syntaxes are supported or want to disable the display of mappings
<parameter>
<code value="excludexml"/>

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@ -1,2 +1,4 @@
### A Heading
You can also use markdown if that's your thing
You can also use markdown if that's your thing
And an icon: ![resource](icon-resource.png)

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@ -0,0 +1,20 @@
<ValueSet xmlns="http://hl7.org/fhir">
<id value="valueset-no-codesystem"/>
<url value="http://somewhere.org/fhir/uv/myig/ValueSet/valueset-no-codesystem"/>
<name value="ValueSetWithNoCodeSystem"/>
<status value="draft"/>
<experimental value="true"/>
<date value="2015-06-22"/>
<compose>
<include>
<system value="http://not-a-known-code-system"/>
<version value="2.36"/>
<concept>
<code value="not-known-code"/>
</concept>
<concept>
<code value="not-known-code"/>
</concept>
</include>
</compose>
</ValueSet>

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@ -0,0 +1,325 @@
<div>
<table class="grid dict">
{% if Library.id.exists() %}
<tr>
<th scope="row"><b>Id: </b></th>
<td style="padding-left: 25px;">{{Library.id}}</td>
</tr>
{% endif %}
{% if Library.url.exists() %}
<tr>
<th scope="row"><b>Url: </b></th>
<td style="padding-left: 25px;">{{Library.url}}</td>
</tr>
{% endif %}
{% if Library.version.exists() %}
<tr>
<th scope="row"><b>Version: </b></th>
<td style="padding-left: 25px;">{{Library.version}}</td>
</tr>
{% endif %}
{% for identifier in Library.identifier %}
<tr>
<th scope="row"><b>Identifier: </b></th>
<td style="padding-left: 25px;">
{% if identifier.type.exists() %}
<p style="margin-bottom: 5px;">
<b>type: </b> <span>{{identifier.type.value}}</span>
</p>
{% endif %}
{% if identifier.value.exists() %}
<p style="margin-bottom: 5px;">
<b>value: </b> <span>{{identifier.value}}</span>
</p>
{% endif %}
</td>
</tr>
{% endfor %}
{% if Library.name.exists() %}
<tr>
<th scope="row"><b>Name: </b></th>
<td style="padding-left: 25px;">{{Library.name}}</td>
</tr>
{% endif %}
{% if Library.title.exists() %}
<tr>
<th scope="row"><b>Title: </b></th>
<td style="padding-left: 25px;">{{Library.title}}</td>
</tr>
{% endif %}
{% if Library.subtitle.exists() %}
<tr>
<th scope="row"><b>Subtitle: </b></th>
<td style="padding-left: 25px;">{{Library.subtitle}}</td>
</tr>
{% endif %}
{% if Library.status.exists() %}
<tr>
<th scope="row"><b>Status: </b></th>
<td style="padding-left: 25px;">{{Library.status.value}}</td>
</tr>
{% endif %}
{% if Library.experimental.exists() %}
<tr>
<th scope="row"><b>Experimental: </b></th>
<td style="padding-left: 25px;">{{Library.experimental.value}}</td>
</tr>
{% endif %}
{% if Library.type.exists() %}
<tr>
<th scope="row"><b>Type: </b></th>
<td style="padding-left: 25px;">
{% if Library.type.coding.exists() %}
{% for coding in Library.type.coding %}
{% if coding.system.exists() %}
<p style="margin-bottom: 5px;">
<b>system: </b> <span>{{coding.system}}</span>
</p>
{% endif %}
{% if coding.code.exists() %}
<p style="margin-bottom: 5px;">
<b>code: </b> <span>{{coding.code}}</span>
</p>
{% endif %}
{% if coding.display.exists() %}
<p style="margin-bottom: 5px;">
<b>display: </b> <span>{{coding.display}}</span>
</p>
{% endif %}
{% endfor %}
{% endif %}
{% if Library.type.coding.exists().not and Library.type.text.exists() %}
{{Library.type.text}}
{% endif %}
</td>
</tr>
{% endif %}
{% if Library.subject.exists() %}
<tr>
<th scope="row"><b>Subject: </b></th>
{%if Library.subject is CodeableConcept %}
<td style="padding-left: 25px;">
{% if Library.subject.coding.exists() %}
{% for coding in Library.subject.coding %}
{% if coding.system.exists() %}
<p style="margin-bottom: 5px;">
<b>system: </b> <span>{{coding.system}}</span>
</p>
{% endif %}
{% if coding.code.exists() %}
<p style="margin-bottom: 5px;">
<b>code: </b> <span>{{coding.code}}</span>
</p>
{% endif %}
{% if coding.display.exists() %}
<p style="margin-bottom: 5px;">
<b>display: </b> <span>{{coding.display}}</span>
</p>
{% endif %}
{% endfor %}
{% endif %}
{% if Library.subject.coding.exists().not and Library.subject.text.exists() %}
{{Library.subject.text}}
{% endif %}
</td>
{% endif %}
{% if Library.subject is Reference %}
<td style="padding-left: 25px;">
{% if Library.subject.reference.exists() %}
<p style="margin-bottom: 5px;">
<b>reference: </b> <span>{{Library.subject.reference}}</span>
</p>
{% endif %}
{% if Library.subject.type.exists() %}
<p style="margin-bottom: 5px;">
<b>type: </b> <span>{{Library.subject.type}}</span>
</p>
{% endif %}
{% if Library.subject.display.exists() %}
<p style="margin-bottom: 5px;">
<b>code: </b> <span>{{Library.subject.display}}</span>
</p>
{% endif %}
</td>
{% endif %}
</tr>
{% endif %}
{% if Library.date.exists() %}
<tr>
<th scope="row"><b>Date: </b></th>
<td style="padding-left: 25px;">{{Library.date}}</td>
</tr>
{% endif %}
{% if Library.publisher.exists() %}
<tr>
<th scope="row"><b>Publisher: </b></th>
<td style="padding-left: 25px;">{{Library.publisher}}</td>
</tr>
{% endif %}
{% if Library.description.exists() %}
<tr>
<th scope="row"><b>Description: </b></th>
<td style="padding-left: 25px;">{{Library.description}}</td>
</tr>
{% endif %}
{% if Library.useContext.exists() %}
<tr>
<th scope="row"><b>Use Context: </b></th>
<td style="padding-left: 25px;">
<table class="grid-dict">
<tr><th><b>code</b></th><th><b>value</b></th></tr>
{% for useContext in Library.useContext %}
<tr>
<td>{{useContext.code.code}}</td>
<td>{{(useContext.value as CodeableConcept).coding.first().code}}</td>
</tr>
{% endfor %}
</table>
</td>
</tr>
{% endif %}
{% if Library.jurisdiction.exists() %}
<tr>
<th scope="row"><b>Jurisdiction: </b></th>
<td style="padding-left: 25px;">{{Library.jurisdiction.first().coding.first().code}}</td>
</tr>
{% endif %}
{% if Library.purpose.exists() %}
<tr>
<th scope="row"><b>Purpose: </b></th>
<td style="padding-left: 25px;">{{Library.purpose}}</td>
</tr>
{% endif %}
{% if Library.usage.exists() %}
<tr>
<th scope="row"><b>Usage: </b></th>
<td style="padding-left: 25px;">{{Library.usage}}</td>
</tr>
{% endif %}
{% if Library.copyright.exists() %}
<tr>
<th scope="row"><b>Copyright: </b></th>
<td style="padding-left: 25px;">{{Library.copyright}}</td>
</tr>
{% endif %}
{% if Library.approvalDate.exists() %}
<tr>
<th scope="row"><b>Approval Date: </b></th>
<td style="padding-left: 25px;">{{Library.approvalDate}}</td>
</tr>
{% endif %}
{% if Library.lastReviewDate.exists() %}
<tr>
<th scope="row"><b>Last Review Date: </b></th>
<td style="padding-left: 25px;">{{Library.lastReviewDate}}</td>
</tr>
{% endif %}
{% if Library.effectivePeriod.exists() %}
<tr>
<th scope="row"><b>Effective Period: </b></th>
<td style="padding-left: 25px;">{{Library.effectivePeriod.start}}..{{Library.effectivePeriod.end}}</td>
</tr>
{% endif %}
{% if Library.relatedArtifact.exists() %}
<tr>
<th scope="row"><b>Related Artifacts: </b></th>
<td style="padding-left: 25px;">
<table class="grid-dict">
<tr><th><b>Type</b></th><th><b>Resource</b></th></tr>
{% for artifact in Library.relatedArtifact %}
<tr><td>{{artifact.type.value}}</td><td>{{artifact.resource}}</td></tr>
{% endfor %}
</table>
</td>
</tr>
{% endif %}
{% if Library.parameter.exists() %}
<tr>
<th scope="row"><b>Parameters: </b></th>
<td style="padding-left: 25px;">
<table class="grid-dict">
<tr><th><b>Name</b></th><th><b>Type</b></th><th><b>Min</b></th><th><b>Max</b></th><th><b>In/Out</b></th></tr>
{% for param in Library.parameter %}
<tr><th>{{param.name}}</th><th>{{param.type}}</th><th>{{param.min}}</th><th>{{param.max}}</th><th>{{param.use}}</th></tr>
{% endfor %}
</table>
</td>
</tr>
{% endif %}
{% if Library.dataRequirement.exists() %}
<tr>
<th scope="row"><b>Data Requirements:</b></th>
<td style="padding-left: 25px;">
<table class="grid-dict">
<tr><th><b>Type</b></th><th><b>Profile</b></th><th><b>MS</b></th><th><b>Code Filter</b></th></tr>
{% for requirement in Library.dataRequirement %}
<tr>
<th>{{requirement.type.value}}</th>
<th>{% for profile in requirement.profile %}{{profile.value}}{% endfor %}</th>
<th>{% for support in requirement.mustSupport %}{{mustSupport}};{% endfor %}</th>
<th>
{% for cfilter in requirement.codeFilter %}
<p style="margin-bottom: 5px;">
<b>code filter: </b>
{% if cfilter.path.exists() or cfilter.valueSet.exists() or cfilter.code.exists() %}
<br/>
{% endif %}
{% if cfilter.path.exists() %}
<span style="padding-left: 25px;">
<b>path: </b><span>{{cfilter.path}}</span>
</span>
{% if cfilter.valueSet.exists() or cfilter.code.exists() %}
<br/>
{% endif %}
{% endif %}
{% if cfilter.valueSet.exists() %}
<span style="padding-left: 25px;">
<b>value set: </b><span>{{cfilter.valueSet.value}}</span>
</span>
{% endif %}
{% for coding in cfilter.code %}
{% if coding.system.exists() %}
<p style="margin-bottom: 5px;">
<b>system: </b> <span>{{coding.system}}</span>
</p>
{% endif %}
{% if coding.code.exists() %}
<p style="margin-bottom: 5px;">
<b>code: </b> <span>{{coding.code}}</span>
</p>
{% endif %}
{% if coding.display.exists() %}
<p style="margin-bottom: 5px;">
<b>display: </b> <span>{{coding.display}}</span>
</p>
{% endif %}
{% endfor %}
</p>
{% endfor %}
</th>
</tr>
{% endfor %}
</table>
</td>
</tr>
{% endif %}
{% for c in Library.content %}
{% if c.contentType = 'text/cql' %}
<tr>
<table>
<tr><th><b>Content: </b> {{c.contentType}}</th></tr>
<tr><td><pre><code>{{c.data.decode('base64').escape('html')}}</code></pre></td></tr>
</table>
</tr>
{% endif %}
{% if c.contentType != 'text/cql' %}
<tr>
<table>
<tr><th><b>Content: </b> {{c.contentType}}</th></tr>
<tr><td><pre><code>{{'Encoded data (' + c.data.length().toString() + ' characters)'}}</code></pre></td></tr>
</table>
</tr>
{% endif %}
{% endfor %}
</table>
</div>