mirror of
https://github.com/huggingface/transformers.git
synced 2025-07-05 05:40:05 +06:00

* add distribution head to forecasting
* formatting
* Add generate function for forecasting
* Add generate function to prediction task
* formatting
* use argsort
* add past_observed_mask ordering
* fix arguments
* docs
* add back test_model_outputs_equivalence test
* formatting
* cleanup
* formatting
* use ACT2CLS
* formatting
* fix add_start_docstrings decorator
* add distribution head and generate function to regression task
add distribution head and generate function to regression task. Also made add PatchTSTForForecastingOutput, PatchTSTForRegressionOutput.
* add distribution head and generate function to regression task
add distribution head and generate function to regression task. Also made add PatchTSTForForecastingOutput, PatchTSTForRegressionOutput.
* fix typos
* add forecast_masking
* fixed tests
* use set_seed
* fix doc test
* formatting
* Update docs/source/en/model_doc/patchtst.md
Co-authored-by: NielsRogge <48327001+NielsRogge@users.noreply.github.com>
* better var names
* rename PatchTSTTranspose
* fix argument names and docs string
* remove compute_num_patches and unused class
* remove assert
* renamed to PatchTSTMasking
* use num_labels for classification
* use num_labels
* use default num_labels from super class
* move model_type after docstring
* renamed PatchTSTForMaskPretraining
* bs -> batch_size
* more review fixes
* use hidden_state
* rename encoder layer and block class
* remove commented seed_number
* edit docstring
* Add docstring
* formatting
* use past_observed_mask
* doc suggestion
* make fix-copies
* use Args:
* add docstring
* add docstring
* change some variable names and add PatchTST before some class names
* formatting
* fix argument types
* fix tests
* change x variable to patch_input
* format
* formatting
* fix-copies
* Update tests/models/patchtst/test_modeling_patchtst.py
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
* move loss to forward
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
* formatting
* fix a bug when pre_norm is set to True
* output_hidden_states is set to False as default
* set pre_norm=True as default
* format docstring
* format
* output_hidden_states is None by default
* add missing docs
* better var names
* docstring: remove default to False in output_hidden_states
* change labels name to target_values in regression task
* format
* fix tests
* change to forecast_mask_ratios and random_mask_ratio
* change mask names
* change future_values to target_values param in the prediction class
* remove nn.Sequential and make PatchTSTBatchNorm class
* black
* fix argument name for prediction
* add output_attentions option
* add output_attentions to PatchTSTEncoder
* formatting
* Add attention output option to all classes
* Remove PatchTSTEncoderBlock
* create PatchTSTEmbedding class
* use config in PatchTSTPatchify
* Use config in PatchTSTMasking class
* add channel_attn_weights
* Add PatchTSTScaler class
* add output_attentions arg to test function
* format
* Update doc with image patchtst.md
* fix-copies
* rename Forecast <-> Prediction
* change name of a few parameters to match with PatchTSMixer.
* Remove *ForForecasting class to match with other time series models.
* make style
* Remove PatchTSTForForecasting in the test
* remove PatchTSTForForecastingOutput class
* change test_forecast_head to test_prediction_head
* style
* fix docs
* fix tests
* change num_labels to num_targets
* Remove PatchTSTTranspose
* remove arguments in PatchTSTMeanScaler
* remove arguments in PatchTSTStdScaler
* add config as an argument to all the scaler classes
* reformat
* Add norm_eps for batchnorm and layernorm
* reformat.
* reformat
* edit docstring
* update docstring
* change variable name pooling to pooling_type
* fix output_hidden_states as tuple
* fix bug when calling PatchTSTBatchNorm
* change stride to patch_stride
* create PatchTSTPositionalEncoding class and restructure the PatchTSTEncoder
* formatting
* initialize scalers with configs
* edit output_hidden_states
* style
* fix forecast_mask_patches doc string
* doc improvements
* move summary to the start
* typo
* fix docstring
* turn off masking when using prediction, regression, classification
* return scaled output
* adjust output when using distribution head
* remove _num_patches function in the config
* get config.num_patches from patchifier init
* add output_attentions docstring, remove tuple in output_hidden_states
* change SamplePatchTSTPredictionOutput and SamplePatchTSTRegressionOutput to SamplePatchTSTOutput
* remove print("model_class: ", model_class)
* change encoder_attention_heads to num_attention_heads
* change norm to norm_layer
* change encoder_layers to num_hidden_layers
* change shared_embedding to share_embedding, shared_projection to share_projection
* add output_attentions
* more robust check of norm_type
* change dropout_path to path_dropout
* edit docstring
* remove positional_encoding function and add _init_pe in PatchTSTPositionalEncoding
* edit shape of cls_token and initialize it
* add a check on the num_input_channels.
* edit head_dim in the Prediction class to allow the use of cls_token
* remove some positional_encoding_type options, remove learn_pe arg, initalize pe
* change Exception to ValueError
* format
* norm_type is "batchnorm"
* make style
* change cls_token shape
* Change forecast_mask_patches to num_mask_patches. Remove forecast_mask_ratios.
* Bring PatchTSTClassificationHead on top of PatchTSTForClassification
* change encoder_ffn_dim to ffn_dim and edit the docstring.
* update variable names to match with the config
* add generation tests
* change num_mask_patches to num_forecast_mask_patches
* Add examples explaining the use of these models
* make style
* Revert "Revert "[time series] Add PatchTST (#25927)" (#27486)"
This reverts commit 78f6ed6c70
.
* make style
* fix default std scaler's minimum_scale
* fix docstring
* close code blocks
* Update docs/source/en/model_doc/patchtst.md
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update tests/models/patchtst/test_modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/configuration_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* Update src/transformers/models/patchtst/modeling_patchtst.py
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
* fix tests
* add add_start_docstrings
* move examples to the forward's docstrings
* update prepare_batch
* update test
* fix test_prediction_head
* fix generation test
* use seed to create generator
* add output_hidden_states and config.num_patches
* add loc and scale args in PatchTSTForPredictionOutput
* edit outputs if if not return_dict
* use self.share_embedding to check instead checking type.
* remove seed
* make style
* seed is an optional int
* fix test
* generator device
* Fix assertTrue test
* swap order of items in outputs when return_dict=False.
* add mask_type and random_mask_ratio to unittest
* Update modeling_patchtst.py
* add add_start_docstrings for regression model
* make style
* update model path
* Edit the ValueError comment in forecast_masking
* update examples
* make style
* fix commented code
* update examples: remove config from from_pretrained call
* Edit example outputs
* Set default target_values to None
* remove config setting in regression example
* Update configuration_patchtst.py
* Update configuration_patchtst.py
* remove config from examples
* change default d_model and ffn_dim
* norm_eps default
* set has_attentions to Trye and define self.seq_length = self.num_patche
* update docstring
* change variable mask_input to do_mask_input
* fix blank space.
* change logger.debug to logger.warning.
* remove unused PATCHTST_INPUTS_DOCSTRING
* remove all_generative_model_classes
* set test_missing_keys=True
* remove undefined params in the docstring.
---------
Co-authored-by: nnguyen <nnguyen@us.ibm.com>
Co-authored-by: NielsRogge <48327001+NielsRogge@users.noreply.github.com>
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
Co-authored-by: Nam Nguyen <namctin@gmail.com>
Co-authored-by: Wesley Gifford <79663411+wgifford@users.noreply.github.com>
Co-authored-by: amyeroberts <22614925+amyeroberts@users.noreply.github.com>
386 lines
15 KiB
Python
386 lines
15 KiB
Python
# coding=utf-8
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# Copyright 2023 The HuggingFace Inc. team. All rights reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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""" Testing suite for the PyTorch PatchTST model. """
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import inspect
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import random
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import tempfile
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import unittest
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from huggingface_hub import hf_hub_download
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from transformers import is_torch_available
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from transformers.models.auto import get_values
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from transformers.testing_utils import is_flaky, require_torch, slow, torch_device
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from ...test_configuration_common import ConfigTester
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from ...test_modeling_common import ModelTesterMixin, floats_tensor, ids_tensor
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from ...test_pipeline_mixin import PipelineTesterMixin
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TOLERANCE = 1e-4
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if is_torch_available():
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import torch
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from transformers import (
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MODEL_FOR_TIME_SERIES_CLASSIFICATION_MAPPING,
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MODEL_FOR_TIME_SERIES_REGRESSION_MAPPING,
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PatchTSTConfig,
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PatchTSTForClassification,
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PatchTSTForPrediction,
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PatchTSTForPretraining,
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PatchTSTForRegression,
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PatchTSTModel,
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)
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@require_torch
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class PatchTSTModelTester:
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def __init__(
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self,
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parent,
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batch_size=13,
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prediction_length=7,
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context_length=14,
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patch_length=5,
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patch_stride=5,
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num_input_channels=1,
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num_time_features=1,
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is_training=True,
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hidden_size=16,
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num_hidden_layers=2,
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num_attention_heads=4,
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intermediate_size=4,
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hidden_act="gelu",
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hidden_dropout_prob=0.1,
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attention_probs_dropout_prob=0.1,
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distil=False,
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seed=42,
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num_targets=2,
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mask_type="random",
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random_mask_ratio=0,
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):
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self.parent = parent
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self.batch_size = batch_size
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self.prediction_length = prediction_length
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self.context_length = context_length
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self.patch_length = patch_length
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self.patch_stride = patch_stride
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self.num_input_channels = num_input_channels
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self.num_time_features = num_time_features
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self.is_training = is_training
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self.hidden_size = hidden_size
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self.num_hidden_layers = num_hidden_layers
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self.num_attention_heads = num_attention_heads
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self.intermediate_size = intermediate_size
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self.hidden_act = hidden_act
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self.hidden_dropout_prob = hidden_dropout_prob
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self.attention_probs_dropout_prob = attention_probs_dropout_prob
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self.mask_type = mask_type
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self.random_mask_ratio = random_mask_ratio
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self.seed = seed
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self.num_targets = num_targets
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self.distil = distil
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self.num_patches = (max(self.context_length, self.patch_length) - self.patch_length) // self.patch_stride + 1
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# define seq_length so that it can pass the test_attention_outputs
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self.seq_length = self.num_patches
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def get_config(self):
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return PatchTSTConfig(
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prediction_length=self.prediction_length,
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patch_length=self.patch_length,
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patch_stride=self.patch_stride,
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num_input_channels=self.num_input_channels,
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d_model=self.hidden_size,
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num_hidden_layers=self.num_hidden_layers,
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num_attention_heads=self.num_attention_heads,
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ffn_dim=self.intermediate_size,
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dropout=self.hidden_dropout_prob,
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attention_dropout=self.attention_probs_dropout_prob,
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context_length=self.context_length,
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activation_function=self.hidden_act,
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seed=self.seed,
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num_targets=self.num_targets,
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mask_type=self.mask_type,
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random_mask_ratio=self.random_mask_ratio,
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)
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def prepare_patchtst_inputs_dict(self, config):
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_past_length = config.context_length
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# bs, num_input_channels, num_patch, patch_len
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# [bs x seq_len x num_input_channels]
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past_values = floats_tensor([self.batch_size, _past_length, self.num_input_channels])
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future_values = floats_tensor([self.batch_size, config.prediction_length, self.num_input_channels])
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inputs_dict = {
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"past_values": past_values,
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"future_values": future_values,
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}
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return inputs_dict
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def prepare_config_and_inputs(self):
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config = self.get_config()
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inputs_dict = self.prepare_patchtst_inputs_dict(config)
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return config, inputs_dict
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def prepare_config_and_inputs_for_common(self):
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config, inputs_dict = self.prepare_config_and_inputs()
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return config, inputs_dict
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@require_torch
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class PatchTSTModelTest(ModelTesterMixin, PipelineTesterMixin, unittest.TestCase):
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all_model_classes = (
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(
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PatchTSTModel,
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PatchTSTForPrediction,
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PatchTSTForPretraining,
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PatchTSTForClassification,
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PatchTSTForRegression,
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)
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if is_torch_available()
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else ()
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)
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pipeline_model_mapping = {"feature-extraction": PatchTSTModel} if is_torch_available() else {}
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is_encoder_decoder = False
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test_pruning = False
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test_head_masking = False
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test_missing_keys = True
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test_torchscript = False
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test_inputs_embeds = False
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test_model_common_attributes = False
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test_resize_embeddings = True
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test_resize_position_embeddings = False
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test_mismatched_shapes = True
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test_model_parallel = False
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has_attentions = True
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def setUp(self):
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self.model_tester = PatchTSTModelTester(self)
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self.config_tester = ConfigTester(
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self,
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config_class=PatchTSTConfig,
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has_text_modality=False,
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prediction_length=self.model_tester.prediction_length,
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)
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def test_config(self):
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self.config_tester.run_common_tests()
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def _prepare_for_class(self, inputs_dict, model_class, return_labels=False):
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inputs_dict = super()._prepare_for_class(inputs_dict, model_class, return_labels=return_labels)
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# if PatchTSTForPretraining
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if model_class == PatchTSTForPretraining:
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inputs_dict.pop("future_values")
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# else if classification model:
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elif model_class in get_values(MODEL_FOR_TIME_SERIES_CLASSIFICATION_MAPPING):
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rng = random.Random(self.model_tester.seed)
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labels = ids_tensor([self.model_tester.batch_size], self.model_tester.num_targets, rng=rng)
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inputs_dict["target_values"] = labels
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inputs_dict.pop("future_values")
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elif model_class in get_values(MODEL_FOR_TIME_SERIES_REGRESSION_MAPPING):
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rng = random.Random(self.model_tester.seed)
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target_values = floats_tensor([self.model_tester.batch_size, self.model_tester.num_targets], rng=rng)
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inputs_dict["target_values"] = target_values
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inputs_dict.pop("future_values")
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return inputs_dict
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def test_save_load_strict(self):
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config, _ = self.model_tester.prepare_config_and_inputs()
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for model_class in self.all_model_classes:
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model = model_class(config)
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with tempfile.TemporaryDirectory() as tmpdirname:
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model.save_pretrained(tmpdirname)
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model2, info = model_class.from_pretrained(tmpdirname, output_loading_info=True)
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self.assertEqual(info["missing_keys"], [])
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def test_hidden_states_output(self):
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def check_hidden_states_output(inputs_dict, config, model_class):
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model = model_class(config)
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model.to(torch_device)
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model.eval()
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with torch.no_grad():
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outputs = model(**self._prepare_for_class(inputs_dict, model_class))
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hidden_states = outputs.hidden_states
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expected_num_layers = getattr(
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self.model_tester, "expected_num_hidden_layers", self.model_tester.num_hidden_layers
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)
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self.assertEqual(len(hidden_states), expected_num_layers)
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num_patch = self.model_tester.num_patches
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self.assertListEqual(
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list(hidden_states[0].shape[-2:]),
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[num_patch, self.model_tester.hidden_size],
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)
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config, inputs_dict = self.model_tester.prepare_config_and_inputs_for_common()
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for model_class in self.all_model_classes:
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inputs_dict["output_hidden_states"] = True
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check_hidden_states_output(inputs_dict, config, model_class)
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# check that output_hidden_states also work using config
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del inputs_dict["output_hidden_states"]
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config.output_hidden_states = True
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check_hidden_states_output(inputs_dict, config, model_class)
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@unittest.skip(reason="we have no tokens embeddings")
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def test_resize_tokens_embeddings(self):
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pass
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def test_model_main_input_name(self):
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model_signature = inspect.signature(getattr(PatchTSTModel, "forward"))
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# The main input is the name of the argument after `self`
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observed_main_input_name = list(model_signature.parameters.keys())[1]
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self.assertEqual(PatchTSTModel.main_input_name, observed_main_input_name)
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def test_forward_signature(self):
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config, _ = self.model_tester.prepare_config_and_inputs_for_common()
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for model_class in self.all_model_classes:
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model = model_class(config)
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signature = inspect.signature(model.forward)
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# signature.parameters is an OrderedDict => so arg_names order is deterministic
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arg_names = [*signature.parameters.keys()]
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if model_class == PatchTSTForPretraining:
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expected_arg_names = [
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"past_values",
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"past_observed_mask",
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]
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elif model_class in get_values(MODEL_FOR_TIME_SERIES_CLASSIFICATION_MAPPING) or model_class in get_values(
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MODEL_FOR_TIME_SERIES_REGRESSION_MAPPING
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):
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expected_arg_names = ["past_values", "target_values", "past_observed_mask"]
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else:
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expected_arg_names = [
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"past_values",
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"past_observed_mask",
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"future_values",
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]
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expected_arg_names.extend(
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[
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"output_hidden_states",
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"output_attentions",
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"return_dict",
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]
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)
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self.assertListEqual(arg_names[: len(expected_arg_names)], expected_arg_names)
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@is_flaky()
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def test_retain_grad_hidden_states_attentions(self):
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super().test_retain_grad_hidden_states_attentions()
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|
|
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def prepare_batch(repo_id="hf-internal-testing/etth1-hourly-batch", file="train-batch.pt"):
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file = hf_hub_download(repo_id=repo_id, filename=file, repo_type="dataset")
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batch = torch.load(file, map_location=torch_device)
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return batch
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|
|
|
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# Note: Pretrained model is not yet downloadable.
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@require_torch
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@slow
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class PatchTSTModelIntegrationTests(unittest.TestCase):
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# Publishing of pretrained weights are under internal review. Pretrained model is not yet downloadable.
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def test_pretrain_head(self):
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model = PatchTSTForPretraining.from_pretrained("namctin/patchtst_etth1_pretrain").to(torch_device)
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batch = prepare_batch()
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|
|
|
torch.manual_seed(0)
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|
with torch.no_grad():
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output = model(past_values=batch["past_values"].to(torch_device)).prediction_output
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num_patch = (
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max(model.config.context_length, model.config.patch_length) - model.config.patch_length
|
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) // model.config.patch_stride + 1
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expected_shape = torch.Size([64, model.config.num_input_channels, num_patch, model.config.patch_length])
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self.assertEqual(output.shape, expected_shape)
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|
|
|
expected_slice = torch.tensor(
|
|
[[[-0.0173]], [[-1.0379]], [[-0.1030]], [[0.3642]], [[0.1601]], [[-1.3136]], [[0.8780]]],
|
|
device=torch_device,
|
|
)
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|
self.assertTrue(torch.allclose(output[0, :7, :1, :1], expected_slice, atol=TOLERANCE))
|
|
|
|
# Publishing of pretrained weights are under internal review. Pretrained model is not yet downloadable.
|
|
def test_prediction_head(self):
|
|
model = PatchTSTForPrediction.from_pretrained("namctin/patchtst_etth1_forecast").to(torch_device)
|
|
batch = prepare_batch(file="test-batch.pt")
|
|
|
|
torch.manual_seed(0)
|
|
with torch.no_grad():
|
|
output = model(
|
|
past_values=batch["past_values"].to(torch_device),
|
|
future_values=batch["future_values"].to(torch_device),
|
|
).prediction_outputs
|
|
expected_shape = torch.Size([64, model.config.prediction_length, model.config.num_input_channels])
|
|
self.assertEqual(output.shape, expected_shape)
|
|
|
|
expected_slice = torch.tensor(
|
|
[[0.5142, 0.6928, 0.6118, 0.5724, -0.3735, -0.1336, -0.7124]],
|
|
device=torch_device,
|
|
)
|
|
self.assertTrue(torch.allclose(output[0, :1, :7], expected_slice, atol=TOLERANCE))
|
|
|
|
def test_prediction_generation(self):
|
|
model = PatchTSTForPrediction.from_pretrained("namctin/patchtst_etth1_forecast").to(torch_device)
|
|
batch = prepare_batch(file="test-batch.pt")
|
|
|
|
torch.manual_seed(0)
|
|
with torch.no_grad():
|
|
outputs = model.generate(past_values=batch["past_values"].to(torch_device))
|
|
expected_shape = torch.Size((64, 1, model.config.prediction_length, model.config.num_input_channels))
|
|
|
|
self.assertEqual(outputs.sequences.shape, expected_shape)
|
|
|
|
expected_slice = torch.tensor(
|
|
[[0.4075, 0.3716, 0.4786, 0.2842, -0.3107, -0.0569, -0.7489]],
|
|
device=torch_device,
|
|
)
|
|
mean_prediction = outputs.sequences.mean(dim=1)
|
|
self.assertTrue(torch.allclose(mean_prediction[0, -1:], expected_slice, atol=TOLERANCE))
|
|
|
|
def test_regression_generation(self):
|
|
model = PatchTSTForRegression.from_pretrained("namctin/patchtst_etth1_regression").to(torch_device)
|
|
batch = prepare_batch(file="test-batch.pt")
|
|
|
|
torch.manual_seed(0)
|
|
with torch.no_grad():
|
|
outputs = model.generate(past_values=batch["past_values"].to(torch_device))
|
|
expected_shape = torch.Size((64, model.config.num_parallel_samples, model.config.num_targets))
|
|
self.assertEqual(outputs.sequences.shape, expected_shape)
|
|
|
|
expected_slice = torch.tensor(
|
|
[[0.3228, 0.4320, 0.4591, 0.4066, -0.3461, 0.3094, -0.8426]],
|
|
device=torch_device,
|
|
)
|
|
mean_prediction = outputs.sequences.mean(dim=1)
|
|
|
|
self.assertTrue(torch.allclose(mean_prediction[0, -1:], expected_slice, rtol=TOLERANCE))
|