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* [FT] First commit for graphormer architecture. The model has no tokenizer, as it uses a collator and preprocessing function for its input management. Architecture to be tested against original one. The arch might need to be changed to fit the checkpoint, but a revert to the original arch will make the code less nice to read. TODO: doc * [FIX] removed test model * [FIX] import error * [FIX] black and flake * [DOC] added paper refs * [FIX] [DOC] * [FIX] black * [DOC] Updated READMEs * [FIX] Order of imports + rm Tokenizer calls * [FIX] Moved assert in class to prevent doc build failure * [FIX] make fix-copies * [Doc] update from code review Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com> * [FIX] Removed Graphormer from Sequence classification model list * [DOC] Added HF copyright to Cython file * [DOC] Fixed comments * [FIX] typos in class doc + removed config classes. Todo: update doc from paper definitions * [FIX] Removed dependency to fairseq, and replaced all asserts with Exception management * [FIX] Homogeneized initialization of weights to pretrained constructor * [FIX] [CP] Updated multi_hop parameter to get same results as in original implementation * [DOC] Relevant parameter description in the configuration file * [DOC] Updated doc and comments in main graphormer file * [FIX] make style and quality checks * [DOC] Fix doc format * [FIX] [WIP] Updated part of the tests, though still a wip * [FIX] [WIP] * [FIX] repo consistency * [FIX] Changed input names for more understandability * [FIX] [BUG] updated num_classes params for propagation in the model * simplified collator * [FIX] Updated tests to follow new naming pattern * [TESTS] Updated test suite along with model * |FIX] rm tokenizer import * [DOC] add link to graphormerdoc * Changed section in doc from text model to graph model * Apply suggestions from code review Spacing, inits Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com> * [DOC] Explain algos_graphormer functions * Cython soft import protection * Rm call to Callable in configuration graphormer * [FIX] replaced asserts with Exceptions * Add org to graphormer checkpoints * Prefixed classes with Graphormer * Management of init functions * format * fixes * fix length file * update indent * relaunching ci * Errors for missing cython imports * fix style * fix style doc Co-authored-by: Sylvain Gugger <35901082+sgugger@users.noreply.github.com> |
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