mirror of
https://github.com/huggingface/transformers.git
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7f9b7b3f0e
* initial commit * First draft that gets outputs without crashing! * Add all the ported openfold dependencies * testing * Restructure config files for ESMFold * Debugging to find output discrepancies * Mainly style * Make model runnable without extra deps * Remove utils and merge them to the modeling file * Use correct gelu and remove some debug prints * More cleanup * Update esm docs * Update conversion script to support ESMFold properly * Port some top-level changes from ESMFold repo * Expand EsmFold docstrings * Make attention_mask optional (default to all 1s) * Add inference test for ESMFold * Use config and not n kwargs * Add modeling output class * Remove einops * Remove chunking in ESM FFN * Update tests for ESMFold * Quality * REpo consistency * Remove tree dependency from ESMFold * make fixup * Add an error in case my structure map function breaks later * Remove needless code * Stop auto-casting the LM to float16 so CPU tests pass * Stop auto-casting the LM to float16 so CPU tests pass * Final test updates * Split test file * Copyright and quality * Unpin PyTorch to see built doc * Fix config file to_dict() method * Add some docstrings to the output * Skip TF checkpoint tests for ESM until we reupload those * make fixup * More docstrings * Unpin to get even with main * Flag example to write Co-authored-by: Sylvain Gugger <Sylvain.gugger@gmail.com> |
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| .. | ||
| internal | ||
| main_classes | ||
| model_doc | ||
| tasks | ||
| _config.py | ||
| _toctree.yml | ||
| accelerate.mdx | ||
| add_new_model.mdx | ||
| add_new_pipeline.mdx | ||
| add_tensorflow_model.mdx | ||
| autoclass_tutorial.mdx | ||
| benchmarks.mdx | ||
| bertology.mdx | ||
| big_models.mdx | ||
| community.mdx | ||
| contributing.md | ||
| converting_tensorflow_models.mdx | ||
| create_a_model.mdx | ||
| custom_models.mdx | ||
| debugging.mdx | ||
| fast_tokenizers.mdx | ||
| glossary.mdx | ||
| hpo_train.mdx | ||
| index.mdx | ||
| installation.mdx | ||
| migration.mdx | ||
| model_sharing.mdx | ||
| model_summary.mdx | ||
| multilingual.mdx | ||
| notebooks.md | ||
| pad_truncation.mdx | ||
| perf_hardware.mdx | ||
| perf_infer_cpu.mdx | ||
| perf_infer_gpu_many.mdx | ||
| perf_infer_gpu_one.mdx | ||
| perf_infer_special.mdx | ||
| perf_train_cpu_many.mdx | ||
| perf_train_cpu.mdx | ||
| perf_train_gpu_many.mdx | ||
| perf_train_gpu_one.mdx | ||
| perf_train_special.mdx | ||
| perf_train_tpu.mdx | ||
| performance.mdx | ||
| perplexity.mdx | ||
| philosophy.mdx | ||
| pipeline_tutorial.mdx | ||
| pr_checks.mdx | ||
| preprocessing.mdx | ||
| quicktour.mdx | ||
| run_scripts.mdx | ||
| sagemaker.mdx | ||
| serialization.mdx | ||
| task_summary.mdx | ||
| testing.mdx | ||
| tokenizer_summary.mdx | ||
| torchscript.mdx | ||
| training.mdx | ||
| troubleshooting.mdx | ||