transformers/utils
Gift Sinthong 2ac5b9325e
[time series] Add PatchTST (#25927)
* Initial commit of PatchTST model classes

Co-authored-by: Phanwadee Sinthong <phsinthong@gmail.com>
Co-authored-by: Nam Nguyen <namctin@gmail.com>
Co-authored-by: Vijay Ekambaram <vijaykr.e@gmail.com>
Co-authored-by: Ngoc Diep Do <55230119+diepi@users.noreply.github.com>
Co-authored-by: Wesley Gifford <79663411+wgifford@users.noreply.github.com>

* Add PatchTSTForPretraining

* update to include classification

Co-authored-by: Phanwadee Sinthong <phsinthong@gmail.com>
Co-authored-by: Nam Nguyen <namctin@gmail.com>
Co-authored-by: Vijay Ekambaram <vijaykr.e@gmail.com>
Co-authored-by: Ngoc Diep Do <55230119+diepi@users.noreply.github.com>
Co-authored-by: Wesley Gifford <79663411+wgifford@users.noreply.github.com>

* clean up auto files

* Add PatchTSTForPrediction

* Fix relative import

* Replace original PatchTSTEncoder with ChannelAttentionPatchTSTEncoder

* temporary adding absolute path + add PatchTSTForForecasting class

* Update base PatchTSTModel + Unittest

* Update ForecastHead to use the config class

* edit cv_random_masking, add mask to model output

* Update configuration_patchtst.py

* add masked_loss to the pretraining

* add PatchEmbeddings

* Update configuration_patchtst.py

* edit loss which considers mask in the pretraining

* remove patch_last option

* Add commits from internal repo

* Update ForecastHead

* Add model weight initilization + unittest

* Update PatchTST unittest to use local import

* PatchTST integration tests for pretraining and prediction

* Added PatchTSTForRegression + update unittest to include label generation

* Revert unrelated model test file

* Combine similar output classes

* update PredictionHead

* Update configuration_patchtst.py

* Add Revin

* small edit to PatchTSTModelOutputWithNoAttention

* Update modeling_patchtst.py

* Updating integration test for forecasting

* Fix unittest after class structure changed

* docstring updates

* change input_size to num_input_channels

* more formatting

* Remove some unused params

* Add a comment for pretrained models

* add channel_attention option

add channel_attention option and remove unused positional encoders.

* Update PatchTST models to use HF's MultiHeadAttention module

* Update paper + github urls

* Fix hidden_state return value

* Update integration test to use PatchTSTForForecasting

* Adding dataclass decorator for model output classes

* Run fixup script

* Rename model repos for integration test

* edit argument explanation

* change individual option to shared_projection

* style

* Rename integration test + import cleanup

* Fix outpu_hidden_states return value

* removed unused mode

* added std, mean and nops scaler

* add initial distributional loss for predition

* fix typo in docs

* add generate function

* formatting

* add num_parallel_samples

* Fix a typo

* copy weighted_average function, edit PredictionHead

* edit PredictionHead

* add distribution head to forecasting

* formatting

* Add generate function for forecasting

* Add generate function to prediction task

* formatting

* use argsort

* add past_observed_mask ordering

* fix arguments

* docs

* add back test_model_outputs_equivalence test

* formatting

* cleanup

* formatting

* use ACT2CLS

* formatting

* fix add_start_docstrings decorator

* add distribution head and generate function to regression task

add distribution head and generate function to regression task. Also made add PatchTSTForForecastingOutput,  PatchTSTForRegressionOutput.

* add distribution head and generate function to regression task

add distribution head and generate function to regression task. Also made add PatchTSTForForecastingOutput,  PatchTSTForRegressionOutput.

* fix typos

* add forecast_masking

* fixed tests

* use set_seed

* fix doc test

* formatting

* Update docs/source/en/model_doc/patchtst.md

Co-authored-by: NielsRogge <48327001+NielsRogge@users.noreply.github.com>

* better var names

* rename PatchTSTTranspose

* fix argument names and docs string

* remove compute_num_patches and unused class

* remove assert

* renamed to PatchTSTMasking

* use num_labels for classification

* use num_labels

* use default num_labels from super class

* move model_type after docstring

* renamed PatchTSTForMaskPretraining

* bs -> batch_size

* more review fixes

* use hidden_state

* rename encoder layer and block class

* remove commented seed_number

* edit docstring

* Add docstring

* formatting

* use past_observed_mask

* doc suggestion

* make fix-copies

* use Args:

* add docstring

* add docstring

* change some variable names and add PatchTST before some class names

* formatting

* fix argument types

* fix tests

* change x variable to patch_input

* format

* formatting

* fix-copies

* Update tests/models/patchtst/test_modeling_patchtst.py

Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* move loss to forward

* Update src/transformers/models/patchtst/modeling_patchtst.py

Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* Update src/transformers/models/patchtst/modeling_patchtst.py

Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* Update src/transformers/models/patchtst/modeling_patchtst.py

Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* Update src/transformers/models/patchtst/modeling_patchtst.py

Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* Update src/transformers/models/patchtst/modeling_patchtst.py

Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>

* formatting

* fix a bug when pre_norm is set to True

* output_hidden_states is set to False as default

* set pre_norm=True as default

* format docstring

* format

* output_hidden_states is None by default

* add missing docs

* better var names

* docstring: remove default to False in output_hidden_states

* change labels name to target_values in regression task

* format

* fix tests

* change to forecast_mask_ratios and random_mask_ratio

* change mask names

* change future_values to target_values param in the prediction class

* remove nn.Sequential and make PatchTSTBatchNorm class

* black

* fix argument name for prediction

* add output_attentions option

* add output_attentions to PatchTSTEncoder

* formatting

* Add attention output option to all classes

* Remove PatchTSTEncoderBlock

* create PatchTSTEmbedding class

* use config in PatchTSTPatchify

* Use config in PatchTSTMasking class

* add channel_attn_weights

* Add PatchTSTScaler class

* add output_attentions arg to test function

* format

* Update doc with image patchtst.md

* fix-copies

* rename Forecast <-> Prediction

* change name of a few parameters to match with PatchTSMixer.

* Remove *ForForecasting class to match with other time series models.

* make style

* Remove PatchTSTForForecasting in the test

* remove PatchTSTForForecastingOutput class

* change test_forecast_head to test_prediction_head

* style

* fix docs

* fix tests

* change num_labels to num_targets

* Remove PatchTSTTranspose

* remove arguments in PatchTSTMeanScaler

* remove arguments in PatchTSTStdScaler

* add config as an argument to all the scaler classes

* reformat

* Add norm_eps for batchnorm and layernorm

* reformat.

* reformat

* edit docstring

* update docstring

* change variable name pooling to pooling_type

* fix output_hidden_states as tuple

* fix bug when calling PatchTSTBatchNorm

* change stride to patch_stride

* create PatchTSTPositionalEncoding class and restructure the PatchTSTEncoder

* formatting

* initialize scalers with configs

* edit output_hidden_states

* style

* fix forecast_mask_patches doc string

---------

Co-authored-by: Gift Sinthong <gift.sinthong@ibm.com>
Co-authored-by: Nam Nguyen <namctin@gmail.com>
Co-authored-by: Vijay Ekambaram <vijaykr.e@gmail.com>
Co-authored-by: Ngoc Diep Do <55230119+diepi@users.noreply.github.com>
Co-authored-by: Wesley Gifford <79663411+wgifford@users.noreply.github.com>
Co-authored-by: Wesley M. Gifford <wmgifford@us.ibm.com>
Co-authored-by: nnguyen <nnguyen@us.ibm.com>
Co-authored-by: Ngoc Diep Do <diiepy@gmail.com>
Co-authored-by: Kashif Rasul <kashif.rasul@gmail.com>
Co-authored-by: NielsRogge <48327001+NielsRogge@users.noreply.github.com>
Co-authored-by: Patrick von Platen <patrick.v.platen@gmail.com>
2023-11-13 19:06:32 +01:00
..
test_module AutoImageProcessor (#20111) 2022-11-08 19:54:41 +00:00
tf_ops
add_pipeline_model_mapping_to_test.py A script to add/update pipeline_model_mapping systematically (#22180) 2023-04-06 18:08:14 +02:00
check_build.py Clean up CUDA kernels (#23455) 2023-05-18 14:14:43 -04:00
check_config_attributes.py Add Seamless M4T model (#25693) 2023-10-23 14:49:48 +02:00
check_config_docstrings.py [Check] Fix config docstring (#26222) 2023-09-18 19:58:01 +02:00
check_copies.py Copied from for test files (#26713) 2023-10-11 14:12:09 +02:00
check_doc_toc.py Doc checks (#25408) 2023-08-10 10:53:22 +02:00
check_docstrings.py Add TensorFlow implementation of ConvNeXTv2 (#25558) 2023-11-01 15:09:55 +00:00
check_doctest_list.py Avoid many failing tests in doctesting (#27262) 2023-11-03 12:47:07 +01:00
check_dummies.py Doc checks (#25408) 2023-08-10 10:53:22 +02:00
check_inits.py [Attention Mask] Refactor all encoder-decoder attention mask (#27086) 2023-10-27 16:42:01 +02:00
check_model_tester.py Add a new script to check model testers' config (#22063) 2023-03-13 19:11:19 +01:00
check_repo.py [time series] Add PatchTST (#25927) 2023-11-13 19:06:32 +01:00
check_self_hosted_runner.py Tiny fix for check_self_hosted_runner.py (#24052) 2023-06-06 18:17:41 +02:00
check_table.py [docs] Update to scripts building index.md (#26546) 2023-10-05 10:20:41 -04:00
check_task_guides.py More utils doc (#25457) 2023-08-17 07:58:35 +02:00
check_tf_ops.py
create_dummy_models.py Fix tiny model script: not using from_pt=True (#27372) 2023-11-08 17:15:57 +01:00
custom_init_isort.py More utils doc (#25457) 2023-08-17 07:58:35 +02:00
download_glue_data.py Raise exceptions instead of asserts (#13907) 2021-10-07 12:44:23 +05:30
extract_warnings.py Make Slack CI reporting stronger (#21823) 2023-02-28 17:12:44 +01:00
get_ci_error_statistics.py Show diff between 2 CI runs on Slack reports (#22798) 2023-04-19 19:27:37 +02:00
get_github_job_time.py Make Slack CI reporting stronger (#21823) 2023-02-28 17:12:44 +01:00
get_modified_files.py exclude deleted files in the fixup script (#21436) 2023-02-03 12:57:02 -05:00
get_previous_daily_ci.py Fix a minor bug in CI slack report (#22906) 2023-04-21 20:36:35 +02:00
get_test_info.py Add an utility file to get information from test files (#21856) 2023-03-01 17:53:29 +01:00
not_doctested.txt Fix line ending in utils/not_doctested.txt (#27459) 2023-11-13 12:35:51 +01:00
notification_service_doc_tests.py Fix slack report failing for doctest (#27042) 2023-10-30 10:48:24 +01:00
notification_service.py Disable CI runner check (#27170) 2023-10-31 11:59:21 +01:00
past_ci_versions.py (Re-)Enable Nightly + Past CI (#22393) 2023-03-30 21:06:35 +02:00
print_env.py Print more library versions in CI (#17384) 2022-06-02 10:24:16 +02:00
release.py More utils doc (#25457) 2023-08-17 07:58:35 +02:00
slow_documentation_tests.txt Add Kosmos-2 model (#24709) 2023-10-30 13:32:17 +01:00
sort_auto_mappings.py More utils doc (#25457) 2023-08-17 07:58:35 +02:00
tests_fetcher.py Run all tests if circleci/create_circleci_config.py is modified (#27413) 2023-11-09 22:01:06 +01:00
update_metadata.py Add image to image pipeline (#25393) 2023-09-22 19:53:55 +03:00
update_tiny_models.py Update tiny model summary file for recent models (#22637) 2023-04-06 22:52:59 +02:00