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30 Commits
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v0.2.1
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@@ -1,14 +1,16 @@
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name: FHIR IG CI/CD Pipeline
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name: FHIR IG CI/CD Pipeline with Version Persistence
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on:
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push:
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branches: [ main, develop ]
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tags:
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- 'v*.*.*' # Trigger on version tags like v0.3.0
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pull_request:
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branches: [ main ]
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env:
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REGISTRY: git.dghs.gov.bd # Replace with your Gitea instance
|
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IMAGE_NAME: gitadmin/bd-core-fhir-ig # Replace with your image name
|
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REGISTRY: git.dghs.gov.bd
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IMAGE_NAME: gitadmin/bd-core-fhir-ig
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||||
|
||||
jobs:
|
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build-ig:
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@@ -18,7 +20,113 @@ jobs:
|
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- name: Checkout repository
|
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uses: actions/checkout@v3
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with:
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fetch-depth: 0 # Full history for proper IG building
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fetch-depth: 0
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- name: Extract version from IG
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id: version
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run: |
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# Extract version from ImplementationGuide resource
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VERSION=$(grep -oP '<version value="\K[^"]+' input/bd.fhir.core.xml | head -1)
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|
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if [ -z "$VERSION" ]; then
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echo "ERROR: Could not extract version from ImplementationGuide XML"
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exit 1
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fi
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|
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echo "Extracted version: $VERSION"
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echo "version=$VERSION" >> $GITHUB_OUTPUT
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|
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# Determine if this is a release build (git tag) or dev build
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if [[ "$GITHUB_REF" == refs/tags/v* ]]; then
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BUILD_TYPE="release"
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TAG_VERSION="${GITHUB_REF#refs/tags/v}"
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# Verify tag matches IG version
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if [ "$TAG_VERSION" != "$VERSION" ]; then
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echo "ERROR: Git tag version ($TAG_VERSION) doesn't match IG version ($VERSION)"
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exit 1
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fi
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else
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BUILD_TYPE="dev"
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fi
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echo "build_type=$BUILD_TYPE" >> $GITHUB_OUTPUT
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echo "Build type: $BUILD_TYPE"
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|
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# NEW STEP: Update package-list.json BEFORE build so IG Publisher can use it
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- name: Pre-build package-list.json update
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run: |
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VERSION="${{ steps.version.outputs.version }}"
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BUILD_TYPE="${{ steps.version.outputs.build_type }}"
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DATE=$(date +%Y-%m-%d)
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|
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# Only update for release builds
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if [ "$BUILD_TYPE" != "release" ]; then
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echo "ℹ️ Dev build - skipping package-list.json pre-build update"
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exit 0
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fi
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echo "📋 Updating package-list.json before build..."
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# Check if package-list.json exists
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if [ ! -f "package-list.json" ]; then
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echo "⚠️ package-list.json not found in repo - history.html won't be generated"
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echo "Creating minimal package-list.json for this build..."
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cat > package-list.json << EOF
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{
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"package-id": "bd.fhir.core",
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"title": "Bangladesh Core FHIR Implementation Guide",
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"canonical": "https://fhir.dghs.gov.bd/core",
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"introduction": "Core FHIR profiles and extensions for Bangladesh healthcare",
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"list": [
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{
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"version": "current",
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"desc": "Continuous Integration Build (latest in version control)",
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"path": "https://fhir.dghs.gov.bd/core/",
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"status": "ci-build",
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"current": true
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}
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]
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}
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EOF
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fi
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# Update package-list.json with new version
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python3 << 'PYEOF'
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import json
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import sys
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version = "$VERSION"
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date = "$DATE"
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|
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with open('package-list.json', 'r') as f:
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pkg_list = json.load(f)
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# Check if this version already exists
|
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version_exists = any(e['version'] == version for e in pkg_list['list'])
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|
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if not version_exists:
|
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new_entry = {
|
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"version": version,
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"date": date,
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"desc": f"Release {version}",
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"path": f"https://fhir.dghs.gov.bd/core/{version}/",
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"status": "trial-use",
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"sequence": "STU 1"
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}
|
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# Insert after 'current' entry
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pkg_list['list'].insert(1, new_entry)
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with open('package-list.json', 'w') as f:
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json.dump(pkg_list, f, indent=2)
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print(f"✅ Added version {version} to package-list.json")
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else:
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print(f"ℹ️ Version {version} already exists in package-list.json")
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PYEOF
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echo "📋 package-list.json is ready for IG Publisher"
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cat package-list.json
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- name: Install Docker CLI
|
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run: |
|
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@@ -26,258 +134,274 @@ jobs:
|
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apt-get install -y docker.io
|
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docker --version
|
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|
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- name: Setup Docker Buildx
|
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uses: docker/setup-buildx-action@v3
|
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with:
|
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install: true
|
||||
|
||||
|
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- name: Build FHIR IG (Copy In/Out)
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- name: Build FHIR IG
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run: |
|
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echo "Building FHIR IG using copy approach..."
|
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echo "Building FHIR IG version ${{ steps.version.outputs.version }}..."
|
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|
||||
# Create a container (don't start yet)
|
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CONTAINER_ID=$(docker create \
|
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hl7fhir/ig-publisher-base:latest \
|
||||
/bin/bash -c "cp -r /home/publisher/ig /tmp/build && cd /tmp/build && _updatePublisher.sh -y && _genonce.sh")
|
||||
|
||||
echo "Container ID: $CONTAINER_ID"
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# Copy all source files into the container
|
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docker cp $(pwd)/. $CONTAINER_ID:/home/publisher/ig/
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|
||||
# Start and wait for completion
|
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docker start -a $CONTAINER_ID
|
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EXIT_CODE=$?
|
||||
|
||||
# Copy outputs back
|
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# Copy outputs
|
||||
echo "Copying outputs from container..."
|
||||
docker cp $CONTAINER_ID:/tmp/build/output ./output || echo "Warning: No output directory"
|
||||
docker cp $CONTAINER_ID:/tmp/build/fsh-generated ./fsh-generated || echo "No FSH generated files"
|
||||
docker cp $CONTAINER_ID:/tmp/build/fsh-generated ./fsh-generated || echo "No FSH generated"
|
||||
docker cp $CONTAINER_ID:/tmp/build/input-cache ./input-cache || echo "No input-cache"
|
||||
docker cp $CONTAINER_ID:/tmp/build/temp ./temp || echo "No temp directory"
|
||||
|
||||
# Show container logs if failed
|
||||
if [ $EXIT_CODE -ne 0 ]; then
|
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echo "Build failed, showing container logs:"
|
||||
echo "Build failed, showing logs:"
|
||||
docker logs $CONTAINER_ID
|
||||
docker rm $CONTAINER_ID
|
||||
exit 1
|
||||
fi
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||||
|
||||
# Cleanup
|
||||
docker rm $CONTAINER_ID
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||||
|
||||
# Verify
|
||||
if [ ! -f "output/index.html" ]; then
|
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echo "ERROR: Build failed - no index.html"
|
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exit 1
|
||||
fi
|
||||
|
||||
# Check if history.html was generated
|
||||
if [ -f "output/history.html" ]; then
|
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echo "✅ history.html generated successfully"
|
||||
else
|
||||
echo "⚠️ WARNING: history.html was not generated"
|
||||
echo "This usually means package-list.json was missing or invalid"
|
||||
fi
|
||||
|
||||
echo "✅ Build successful!"
|
||||
|
||||
- name: Verify IG Output
|
||||
- name: Update package-feed.xml for releases
|
||||
if: steps.version.outputs.build_type == 'release'
|
||||
run: |
|
||||
ls -la output/
|
||||
if [ ! -f "output/index.html" ]; then
|
||||
echo "ERROR: IG build failed - no index.html found"
|
||||
exit 1
|
||||
fi
|
||||
echo "IG build successful!"
|
||||
VERSION="${{ steps.version.outputs.version }}"
|
||||
DATETIME=$(date -u +%Y-%m-%dT%H:%M:%SZ)
|
||||
|
||||
- name: Login to Gitea Container Registry
|
||||
if: github.ref == 'refs/heads/main'
|
||||
uses: docker/login-action@v3
|
||||
with:
|
||||
registry: ${{ env.REGISTRY }}
|
||||
username: ${{ gitea.actor }}
|
||||
password: ${{ secrets.ACCESS_TOKEN_GITEA }}
|
||||
cat > update-feed.py << 'EOF'
|
||||
import sys
|
||||
import xml.etree.ElementTree as ET
|
||||
|
||||
- name: Extract metadata
|
||||
if: github.ref == 'refs/heads/main'
|
||||
id: meta
|
||||
uses: docker/metadata-action@v4
|
||||
with:
|
||||
images: ${{ env.REGISTRY }}/${{ env.IMAGE_NAME }}
|
||||
tags: |
|
||||
type=ref,event=branch
|
||||
type=ref,event=pr
|
||||
type=sha,prefix={{branch}}-
|
||||
type=raw,value=latest,enable={{is_default_branch}}
|
||||
version = sys.argv[1]
|
||||
datetime_iso = sys.argv[2]
|
||||
|
||||
- name: Build and push Docker image
|
||||
if: github.ref == 'refs/heads/main'
|
||||
uses: docker/build-push-action@v6
|
||||
ET.register_namespace('', 'http://www.w3.org/2005/Atom')
|
||||
|
||||
tree = ET.parse('package-feed.xml')
|
||||
root = tree.getroot()
|
||||
ns = {'atom': 'http://www.w3.org/2005/Atom'}
|
||||
|
||||
updated_elem = root.find('atom:updated', ns)
|
||||
if updated_elem is not None:
|
||||
updated_elem.text = datetime_iso
|
||||
|
||||
entry_exists = False
|
||||
for entry in root.findall('atom:entry', ns):
|
||||
title = entry.find('atom:title', ns)
|
||||
if title is not None and version in title.text:
|
||||
entry_exists = True
|
||||
entry_updated = entry.find('atom:updated', ns)
|
||||
if entry_updated is not None:
|
||||
entry_updated.text = datetime_iso
|
||||
break
|
||||
|
||||
if not entry_exists:
|
||||
new_entry = ET.Element('{http://www.w3.org/2005/Atom}entry')
|
||||
|
||||
title = ET.SubElement(new_entry, '{http://www.w3.org/2005/Atom}title')
|
||||
title.text = f"bd.fhir.core version {version}"
|
||||
|
||||
link = ET.SubElement(new_entry, '{http://www.w3.org/2005/Atom}link')
|
||||
link.set('rel', 'alternate')
|
||||
link.set('href', f"https://fhir.dghs.gov.bd/core/{version}/")
|
||||
|
||||
entry_id = ET.SubElement(new_entry, '{http://www.w3.org/2005/Atom}id')
|
||||
entry_id.text = f"https://fhir.dghs.gov.bd/core/{version}/"
|
||||
|
||||
entry_updated = ET.SubElement(new_entry, '{http://www.w3.org/2005/Atom}updated')
|
||||
entry_updated.text = datetime_iso
|
||||
|
||||
summary = ET.SubElement(new_entry, '{http://www.w3.org/2005/Atom}summary')
|
||||
summary.text = f"Release {version} of Bangladesh Core FHIR Implementation Guide"
|
||||
|
||||
insert_pos = 0
|
||||
for i, child in enumerate(root):
|
||||
if child.tag.endswith('entry'):
|
||||
insert_pos = i
|
||||
break
|
||||
insert_pos = i + 1
|
||||
|
||||
root.insert(insert_pos, new_entry)
|
||||
|
||||
tree.write('output/package-feed.xml', encoding='utf-8', xml_declaration=True)
|
||||
print(f"✅ Updated package-feed.xml")
|
||||
EOF
|
||||
|
||||
python3 update-feed.py "$VERSION" "$DATETIME"
|
||||
|
||||
# Also copy the updated package-list.json to output
|
||||
cp package-list.json output/package-list.json
|
||||
|
||||
echo "📋 Updated registry files"
|
||||
|
||||
- name: Prepare deployment artifact
|
||||
run: |
|
||||
VERSION="${{ steps.version.outputs.version }}"
|
||||
BUILD_TYPE="${{ steps.version.outputs.build_type }}"
|
||||
|
||||
tar -czf ig-output.tar.gz -C output .
|
||||
|
||||
echo "version=$VERSION" > deployment.env
|
||||
echo "build_type=$BUILD_TYPE" >> deployment.env
|
||||
echo "build_date=$(date -u +%Y-%m-%dT%H:%M:%SZ)" >> deployment.env
|
||||
|
||||
# List what's in the output
|
||||
echo "📦 Output contents:"
|
||||
ls -lh output/ | grep -E "(history\.html|package-list\.json|package-feed\.xml|index\.html)"
|
||||
|
||||
ls -lh ig-output.tar.gz
|
||||
|
||||
- name: Upload artifact
|
||||
uses: actions/upload-artifact@v3
|
||||
with:
|
||||
context: .
|
||||
file: ./Dockerfile.serve
|
||||
push: true
|
||||
tags: ${{ steps.meta.outputs.tags }}
|
||||
labels: ${{ steps.meta.outputs.labels }}
|
||||
# cache-from: type=gha
|
||||
# cache-to: type=gha,mode=max
|
||||
name: ig-output
|
||||
path: |
|
||||
ig-output.tar.gz
|
||||
deployment.env
|
||||
package-list.json
|
||||
package-feed.xml
|
||||
retention-days: 30
|
||||
|
||||
deploy:
|
||||
needs: build-ig
|
||||
runs-on: ubuntu-latest
|
||||
if: github.ref == 'refs/heads/main'
|
||||
if: (github.ref == 'refs/heads/main' || startsWith(github.ref, 'refs/tags/v'))
|
||||
|
||||
steps:
|
||||
- name: Checkout repository
|
||||
uses: actions/checkout@v3
|
||||
- name: Download artifact
|
||||
uses: actions/download-artifact@v3
|
||||
with:
|
||||
name: ig-output
|
||||
|
||||
- name: Load deployment env
|
||||
id: deploy_info
|
||||
run: |
|
||||
source deployment.env
|
||||
echo "version=$version" >> $GITHUB_OUTPUT
|
||||
echo "build_type=$build_type" >> $GITHUB_OUTPUT
|
||||
echo "build_date=$build_date" >> $GITHUB_OUTPUT
|
||||
|
||||
echo "Deploying version: $version"
|
||||
echo "Build type: $build_type"
|
||||
|
||||
- name: Deploy to server
|
||||
uses: appleboy/ssh-action@v1.0.3
|
||||
env:
|
||||
REGISTRY: ${{ env.REGISTRY }}
|
||||
IMAGE_NAME: ${{ env.IMAGE_NAME }}
|
||||
IMAGE_TAG: latest
|
||||
uses: appleboy/scp-action@v0.1.7
|
||||
with:
|
||||
host: ${{ secrets.DEPLOY_HOST }}
|
||||
username: ${{ secrets.DEPLOY_USER }}
|
||||
password: ${{ secrets.DEPLOY_PASSWORD }}
|
||||
port: ${{ secrets.DEPLOY_PORT || 22 }}
|
||||
source: "ig-output.tar.gz,deployment.env,package-list.json,package-feed.xml"
|
||||
target: "/tmp/fhir-ig-deploy/"
|
||||
|
||||
- name: Execute deployment on server
|
||||
uses: appleboy/ssh-action@v1.0.3
|
||||
with:
|
||||
host: ${{ secrets.DEPLOY_HOST }}
|
||||
username: ${{ secrets.DEPLOY_USER }}
|
||||
password: ${{ secrets.DEPLOY_PASSWORD }}
|
||||
port: ${{ secrets.DEPLOY_PORT || 22 }}
|
||||
envs: REGISTRY,IMAGE_NAME,IMAGE_TAG
|
||||
script: |
|
||||
# Create deployment directory if it doesn't exist
|
||||
mkdir -p /opt/fhir-ig
|
||||
cd /opt/fhir-ig
|
||||
|
||||
# Create docker-compose.prod.yml
|
||||
cat > docker-compose.prod.yml << EOF
|
||||
|
||||
services:
|
||||
fhir-ig:
|
||||
image: \${REGISTRY}/\${IMAGE_NAME}:\${IMAGE_TAG:-latest}
|
||||
container_name: fhir-ig-app
|
||||
restart: unless-stopped
|
||||
ports:
|
||||
- "80:80"
|
||||
environment:
|
||||
- NODE_ENV=production
|
||||
networks:
|
||||
- fhir-ig-network
|
||||
healthcheck:
|
||||
test: ["CMD", "wget", "--no-verbose", "--tries=1", "--spider", "http://127.0.0.1/health"]
|
||||
interval: 30s
|
||||
timeout: 10s
|
||||
retries: 3
|
||||
start_period: 40s
|
||||
logging:
|
||||
driver: "json-file"
|
||||
options:
|
||||
max-size: "10m"
|
||||
max-file: "3"
|
||||
volumes:
|
||||
- fhir-ig-logs:/var/log/nginx
|
||||
|
||||
networks:
|
||||
fhir-ig-network:
|
||||
driver: bridge
|
||||
|
||||
volumes:
|
||||
fhir-ig-logs:
|
||||
driver: local
|
||||
EOF
|
||||
|
||||
# Create deployment script
|
||||
cat > deploy.sh << 'DEPLOY_SCRIPT'
|
||||
#!/bin/bash
|
||||
set -e
|
||||
|
||||
# Configuration
|
||||
COMPOSE_FILE="docker-compose.prod.yml"
|
||||
SERVICE_NAME="fhir-ig"
|
||||
BACKUP_DIR="/opt/backups/fhir-ig"
|
||||
LOG_FILE="/var/log/fhir-ig-deploy.log"
|
||||
# Load deployment info
|
||||
source /tmp/fhir-ig-deploy/deployment.env
|
||||
|
||||
# Create directories
|
||||
mkdir -p "$BACKUP_DIR"
|
||||
mkdir -p "$(dirname "$LOG_FILE")"
|
||||
echo "=========================================="
|
||||
echo "Deploying FHIR IG"
|
||||
echo "Version: $version"
|
||||
echo "Build Type: $build_type"
|
||||
echo "Build Date: $build_date"
|
||||
echo "=========================================="
|
||||
|
||||
# Logging function
|
||||
log() {
|
||||
echo "$(date '+%Y-%m-%d %H:%M:%S') - $1" | tee -a "$LOG_FILE"
|
||||
}
|
||||
# Create version directory structure
|
||||
VERSIONS_DIR="/opt/fhir-ig/versions"
|
||||
mkdir -p "$VERSIONS_DIR"
|
||||
|
||||
log "Starting deployment of BD Core FHIR IG..."
|
||||
log "Registry: $REGISTRY"
|
||||
log "Image: $IMAGE_NAME"
|
||||
log "Tag: $IMAGE_TAG"
|
||||
# Determine target directory
|
||||
if [ "$build_type" == "release" ]; then
|
||||
TARGET_DIR="$VERSIONS_DIR/$version"
|
||||
echo "📦 Deploying release version to: $TARGET_DIR"
|
||||
else
|
||||
TARGET_DIR="$VERSIONS_DIR/dev"
|
||||
echo "🔧 Deploying dev build to: $TARGET_DIR"
|
||||
|
||||
# Login to registry
|
||||
echo "$GITEA_PASSWORD" | docker login $REGISTRY -u "$GITEA_USERNAME" --password-stdin
|
||||
|
||||
# Backup current container if it exists
|
||||
if docker compose -f "$COMPOSE_FILE" ps --services --filter "status=running" | grep -q "$SERVICE_NAME"; then
|
||||
log "Creating backup of current deployment..."
|
||||
BACKUP_FILE="$BACKUP_DIR/backup-$(date +%Y%m%d-%H%M%S).tar.gz"
|
||||
docker compose -f "$COMPOSE_FILE" exec -T "$SERVICE_NAME" tar -czf - -C /usr/share/nginx/html . > "$BACKUP_FILE" 2>/dev/null || log "Backup failed, continuing..."
|
||||
echo "Cleaning old dev files..."
|
||||
rm -rf "$TARGET_DIR"/*
|
||||
fi
|
||||
|
||||
# Set environment variables for docker compose
|
||||
export REGISTRY="$REGISTRY"
|
||||
export IMAGE_NAME="$IMAGE_NAME"
|
||||
export IMAGE_TAG="$IMAGE_TAG"
|
||||
# Create target directory
|
||||
mkdir -p "$TARGET_DIR"
|
||||
|
||||
# Pull the latest image
|
||||
log "Pulling latest image: $REGISTRY/$IMAGE_NAME:$IMAGE_TAG..."
|
||||
docker pull "$REGISTRY/$IMAGE_NAME:$IMAGE_TAG"
|
||||
# Extract IG output
|
||||
echo "Extracting IG output..."
|
||||
tar -xzf /tmp/fhir-ig-deploy/ig-output.tar.gz -C "$TARGET_DIR"
|
||||
|
||||
# docker pull "\${REGISTRY}/\${IMAGE_NAME}:\${IMAGE_TAG}"
|
||||
# Verify history.html was deployed
|
||||
if [ -f "$TARGET_DIR/history.html" ]; then
|
||||
echo "✅ history.html deployed successfully"
|
||||
else
|
||||
echo "⚠️ WARNING: history.html not found in deployment"
|
||||
fi
|
||||
|
||||
# Stop and remove old container
|
||||
log "Stopping old container..."
|
||||
docker compose -f "$COMPOSE_FILE" down || log "No existing container to stop"
|
||||
cp /tmp/fhir-ig-deploy/package-list.json "$VERSIONS_DIR/package-list.json"
|
||||
|
||||
# Start new container
|
||||
log "Starting new container..."
|
||||
docker compose -f "$COMPOSE_FILE" up -d
|
||||
# Copy package-feed.xml to root
|
||||
cp /tmp/fhir-ig-deploy/package-feed.xml "$VERSIONS_DIR/package-feed.xml"
|
||||
|
||||
# Wait for container to be healthy
|
||||
# log "Waiting for container to become healthy..."
|
||||
# timeout=120
|
||||
# elapsed=0
|
||||
# healthy=false
|
||||
# Update 'current' symlink for releases
|
||||
if [ "$build_type" == "release" ]; then
|
||||
echo "Updating 'current' symlink to point to $version"
|
||||
rm -f "$VERSIONS_DIR/current"
|
||||
ln -sf "$version" "$VERSIONS_DIR/current"
|
||||
fi
|
||||
|
||||
# while [ $elapsed -lt $timeout ]; do
|
||||
# if docker compose -f "$COMPOSE_FILE" ps --format json | grep -q '"Health":"healthy"'; then
|
||||
# log "Container is healthy!"
|
||||
# healthy=true
|
||||
# break
|
||||
# fi
|
||||
# sleep 5
|
||||
# elapsed=$((elapsed + 5))
|
||||
# log "Waiting... ($elapsed/$timeout seconds)"
|
||||
# done
|
||||
# Ensure nginx container is running with correct config
|
||||
cd /opt/fhir-ig
|
||||
|
||||
# if [ "$healthy" = false ]; then
|
||||
# log "ERROR: Container failed to become healthy within $timeout seconds"
|
||||
# docker compose -f "$COMPOSE_FILE" logs --tail=50
|
||||
# log "Rolling back..."
|
||||
# docker compose -f "$COMPOSE_FILE" down
|
||||
# exit 1
|
||||
# fi
|
||||
# Download deployment files if they don't exist
|
||||
if [ ! -f "docker-compose.prod.yml" ]; then
|
||||
echo "ERROR: docker-compose.prod.yml not found!"
|
||||
echo "Please deploy the updated docker-compose.prod.yml and nginx.conf first"
|
||||
exit 1
|
||||
fi
|
||||
|
||||
# Cleanup old images (keep last 3 versions)
|
||||
log "Cleaning up old images..."
|
||||
docker images "\${REGISTRY}/\${IMAGE_NAME}" --format "table {{.Repository}}:{{.Tag}}\t{{.CreatedAt}}" | tail -n +2 | sort -k2 -r | tail -n +4 | awk '{print $1}' | xargs -r docker rmi || log "No old images to clean"
|
||||
# Force recreate container to ensure new config/mounts are applied
|
||||
# This handles "stuck" states better than a simple restart
|
||||
docker compose -f docker-compose.prod.yml up -d --force-recreate fhir-ig
|
||||
|
||||
# Cleanup old backups (keep only last 5)
|
||||
log "Cleaning up old backups..."
|
||||
ls -t "$BACKUP_DIR"/backup-*.tar.gz 2>/dev/null | tail -n +6 | xargs -r rm || log "No old backups to clean"
|
||||
# Cleanup
|
||||
rm -rf /tmp/fhir-ig-deploy
|
||||
|
||||
log "Deployment completed successfully!"
|
||||
log "🌐 Service available at: http://$(hostname -I | awk '{print $1}')"
|
||||
echo "=========================================="
|
||||
echo "✅ Deployment completed successfully!"
|
||||
echo "Version $version is now available at:"
|
||||
if [ "$build_type" == "release" ]; then
|
||||
echo " - https://fhir.dghs.gov.bd/core/$version/"
|
||||
echo " - https://fhir.dghs.gov.bd/core/$version/history.html"
|
||||
echo " - https://fhir.dghs.gov.bd/core/ (current)"
|
||||
else
|
||||
echo " - https://fhir.dghs.gov.bd/core/dev/"
|
||||
fi
|
||||
echo "=========================================="
|
||||
|
||||
# Display final status
|
||||
docker compose -f "$COMPOSE_FILE" ps
|
||||
DEPLOY_SCRIPT
|
||||
|
||||
# Make deploy script executable
|
||||
chmod +x deploy.sh
|
||||
|
||||
# Set registry credentials
|
||||
export GITEA_USERNAME="${{ gitea.actor }}"
|
||||
export GITEA_PASSWORD="${{ secrets.ACCESS_TOKEN_GITEA }}"
|
||||
|
||||
# Execute deployment
|
||||
./deploy.sh
|
||||
# List all versions
|
||||
echo "Available versions:"
|
||||
ls -lh "$VERSIONS_DIR" | grep -v total
|
||||
|
||||
23
CHANGELOG.md
Normal file
23
CHANGELOG.md
Normal file
@@ -0,0 +1,23 @@
|
||||
# Changelog
|
||||
|
||||
|
||||
## [0.2.0] – 2025-10-02
|
||||
**First official draft release of BD-Core-FHIR-IG**
|
||||
|
||||
### Added
|
||||
- **BDPatientProfile** with Bangladesh-specific identifier and address extensions.
|
||||
- **BDPractitionerProfile** to capture practitioner details.
|
||||
- **Identifier CodeSystem and ValueSet** including:
|
||||
- National ID (NID)
|
||||
- Birth Registration Number (BRN)
|
||||
- Unique Health ID (UHID)
|
||||
- **Bangladesh Address profile** with Division, District, Upazila, and Union levels.
|
||||
- Initial **examples** for Patient and Practitioner resources.
|
||||
- Configured **bd.fhir.core.xml** with canonical URL `https://fhir.dghs.gov.bd/core`.
|
||||
|
||||
### Notes
|
||||
- This is a **pre-release draft**.
|
||||
- Backward compatibility is **not guaranteed** until `1.0.0`.
|
||||
- Future drafts may adjust slicing rules, bindings, and extensions.
|
||||
|
||||
---
|
||||
@@ -1,42 +0,0 @@
|
||||
# Multi-stage build for serving FHIR IG output
|
||||
FROM nginx:alpine
|
||||
|
||||
# Copy the built IG output to nginx html directory
|
||||
# (Uncomment and adjust the path if needed)
|
||||
COPY output/ /usr/share/nginx/html/
|
||||
|
||||
# Copy custom nginx configuration
|
||||
COPY nginx.conf /etc/nginx/nginx.conf
|
||||
|
||||
# Create a non-root user for security
|
||||
RUN addgroup -g 1001 -S nginx-user && \
|
||||
adduser -S -D -H -u 1001 -h /var/cache/nginx -s /sbin/nologin -G nginx-user -g nginx-user nginx-user
|
||||
|
||||
# Set proper permissions for Nginx directories
|
||||
RUN chown -R nginx-user:nginx-user /usr/share/nginx/html && \
|
||||
chown -R nginx-user:nginx-user /var/cache/nginx && \
|
||||
chown -R nginx-user:nginx-user /var/log/nginx && \
|
||||
chown -R nginx-user:nginx-user /etc/nginx/conf.d
|
||||
|
||||
# Fix Nginx PID permission issue
|
||||
RUN mkdir -p /var/cache/nginx/run && \
|
||||
chown -R nginx-user:nginx-user /var/cache/nginx/run
|
||||
|
||||
# Update nginx.conf to point PID to writable location
|
||||
# Ensure your nginx.conf has:
|
||||
# pid /var/cache/nginx/run/nginx.pid;
|
||||
|
||||
# Switch to non-root user
|
||||
USER nginx-user
|
||||
|
||||
# Health check
|
||||
# HEALTHCHECK --interval=30s --timeout=3s --start-period=5s --retries=3 \
|
||||
# CMD curl -f http://localhost/ || exit 1
|
||||
|
||||
EXPOSE 80
|
||||
|
||||
# Start Nginx in foreground
|
||||
# CMD ["nginx", "-g", "daemon off;"]
|
||||
|
||||
CMD ["nginx", "-g", "daemon off;", "-c", "/etc/nginx/nginx.conf"]
|
||||
|
||||
2
ig.ini
2
ig.ini
@@ -1,7 +1,7 @@
|
||||
[IG]
|
||||
# ini file for the Implementation Guide publisher
|
||||
# see comments below for instructions
|
||||
ig = input/myig.xml
|
||||
ig = input/bd.fhir.core.xml
|
||||
#template = fhir.base.template#current
|
||||
template = #bd-national-template
|
||||
#template = D:\Git\templates\ig-template-base
|
||||
|
||||
@@ -13,7 +13,7 @@
|
||||
</extension>-->
|
||||
<url value="https://fhir.dghs.gov.bd/core/ImplementationGuide/bd.fhir.core"/>
|
||||
<!-- This version will propagate to all artifacts unless the "propagate-version" extension is overridden -->
|
||||
<version value="0.2.0"/>
|
||||
<version value="0.2.1"/>
|
||||
<name value="BangladeshCoreFHIRIG"/>
|
||||
<title value="Bangladesh Core FHIR Implementation Guide"/>
|
||||
<status value="active"/>
|
||||
@@ -78,9 +78,6 @@
|
||||
<extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status">
|
||||
<valueCode value="trial-use"/>
|
||||
</extension>
|
||||
<extension url="http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm">
|
||||
<valueInteger value="3"/>
|
||||
</extension>
|
||||
<nameUrl value="spec.html"/>
|
||||
<title value="Detailed BD-Core-FHIR Specification"/>
|
||||
<generation value="markdown"/>
|
||||
@@ -114,7 +111,7 @@
|
||||
<!-- releaselabel should be the ballot status for HL7-published IGs. -->
|
||||
<parameter>
|
||||
<code value="releaselabel"/>
|
||||
<value value="Published by MoHFW"/>
|
||||
<value value="Published by DGHS, MoHFW"/>
|
||||
</parameter>
|
||||
<parameter>
|
||||
<code value="find-other-resources"/>
|
||||
@@ -153,10 +150,6 @@
|
||||
<code value="excludemap"/>
|
||||
<value value="true"/>
|
||||
</parameter>-->
|
||||
<parameter>
|
||||
<code value="showsource"/>
|
||||
<value value="true"/>
|
||||
</parameter>
|
||||
<parameter>
|
||||
<code value="i18n-default-lang"/>
|
||||
<value value="en"/>
|
||||
@@ -177,9 +170,5 @@
|
||||
<code value="translation-sources"/>
|
||||
<value value="input/translations-fr"/>
|
||||
</parameter>
|
||||
<parameter>
|
||||
<code value="fcp-approved-specification"/>
|
||||
<value value="false"/>
|
||||
</parameter>
|
||||
</definition>
|
||||
</ImplementationGuide>
|
||||
@@ -5,4 +5,4 @@ Title: "ICD 11"
|
||||
Description: "Condition coded with ICD-11"
|
||||
|
||||
* code 1..1 MS
|
||||
* code from http://id.who.int/icd/release/11/mms (preferred)
|
||||
* code from BDConditionICD11VS (preferred)
|
||||
|
||||
@@ -4,6 +4,8 @@ Title: "Bangladesh Immunization Reaction Code System"
|
||||
Description: "Codes for adverse reactions after vaccination in Bangladesh."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-immunization-reaction"
|
||||
* ^status = #active
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
* ^content = #complete
|
||||
|
||||
* #NONE "No Reaction"
|
||||
|
||||
@@ -6,6 +6,8 @@ Id: bd-blood-groups
|
||||
Title: "Bangladesh Blood Group CodeSystem"
|
||||
Description: "Blood group codes according to CCDS guideline"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-blood-groups"
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
* ^content = #complete
|
||||
* #1 "O Positive"
|
||||
* #2 "O Negative"
|
||||
@@ -20,7 +22,7 @@ Description: "Blood group codes according to CCDS guideline"
|
||||
// ValueSet for BD Blood Groups
|
||||
// ---------------------------
|
||||
ValueSet: BDBloodGroupVS
|
||||
Id: bd-blood-group-vs
|
||||
Id: bd-blood-group-valueset
|
||||
Title: "Bangladesh Blood Group ValueSet"
|
||||
Description: "Blood group value set according to CCDS guideline"
|
||||
* include codes from system BDBloodGroupCS
|
||||
|
||||
@@ -1,7 +1,9 @@
|
||||
CodeSystem: BDCountryListCS
|
||||
Id: bd-country-list-cs
|
||||
Id: bd-country-list
|
||||
Title: "Nationality List"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-country-list"
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
|
||||
* #4 "Afghan"
|
||||
* #8 "Albanian"
|
||||
@@ -194,8 +196,8 @@ Title: "Nationality List"
|
||||
|
||||
|
||||
ValueSet: BDCountryListVS
|
||||
Id: bd-country-list-vs
|
||||
Id: bd-country-list-valueset
|
||||
Title: "Nationality ValueSet"
|
||||
Description: "Nationality value set"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-country-list"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-country-list-valueset"
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-country-list
|
||||
|
||||
@@ -1,8 +1,10 @@
|
||||
CodeSystem: BDGeoCodesCS
|
||||
Id: bd-geocodes-cs
|
||||
Id: bd-geocodes
|
||||
Title: "Bangladesh GeoCodes CodeSystem"
|
||||
Description: "Bangladesh GeoCodes"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-geocodes"
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
// DIvisions
|
||||
* #30 "Dhaka"
|
||||
* #20 "Chattogram"
|
||||
@@ -1601,10 +1603,10 @@ Description: "Bangladesh GeoCodes"
|
||||
* #4589009077 "Sreebardi Pourasabha"
|
||||
|
||||
ValueSet: BDDivisionsVS
|
||||
Id: bd-division-code-vs
|
||||
Id: bd-division-code-valueset
|
||||
Title: "Bangladesh Division ValueSet"
|
||||
Description: "Bangladesh Division Codes (only two-digit codes)"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-divisions"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-division-code-valueset"
|
||||
|
||||
// include only codes that are exactly 2 digits
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-geocodes
|
||||
@@ -1612,10 +1614,10 @@ Description: "Bangladesh Division Codes (only two-digit codes)"
|
||||
|
||||
|
||||
ValueSet: BDDistrictsVS
|
||||
Id: bd-district-code-vs
|
||||
Id: bd-district-code-valueset
|
||||
Title: "Bangladesh district ValueSet"
|
||||
Description: "Bangladesh district Codes (only two-digit codes)"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-districts"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-district-code-valueset"
|
||||
|
||||
// include only codes that are exactly 4 digits
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-geocodes
|
||||
@@ -1623,10 +1625,10 @@ Description: "Bangladesh district Codes (only two-digit codes)"
|
||||
|
||||
|
||||
ValueSet: BDCityCorporationsVS
|
||||
Id: bd-city-corporations-code-vs
|
||||
Id: bd-city-corporation-code-valueset
|
||||
Title: "Bangladesh City Corperation ValueSet"
|
||||
Description: "Bangladesh City Corperation Codes (only two-digit codes)"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-city-corporations"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-city-corporation-code-valueset"
|
||||
|
||||
// include only codes that are exactly 6 digits
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-geocodes
|
||||
@@ -1634,20 +1636,20 @@ Description: "Bangladesh City Corperation Codes (only two-digit codes)"
|
||||
|
||||
|
||||
ValueSet: BDUpazillasVS
|
||||
Id: bd-upazillas-code-vs
|
||||
Id: bd-upazilla-code-valueset
|
||||
Title: "Bangladesh Upazila ValueSet"
|
||||
Description: "Bangladesh Upazila Codes (only two-digit codes)"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-upazillas"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-upazilla-code-valueset"
|
||||
|
||||
// include only codes that are exactly 8 digits
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-geocodes
|
||||
where code regex "^[0-9]{8}$"
|
||||
|
||||
ValueSet: BDMunicipalitiesVS
|
||||
Id: bd-municipalities-code-vs
|
||||
Id: bd-municipalities-code-valueset
|
||||
Title: "Bangladesh Municipalities ValueSet"
|
||||
Description: "Bangladesh Municipalities Codes (only two-digit codes)"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-municipalities"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-municipalities-code-valueset"
|
||||
|
||||
// include only codes that are exactly 10 digits
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-geocodes
|
||||
|
||||
@@ -1,9 +1,12 @@
|
||||
//// this code systems for Identifier types
|
||||
|
||||
CodeSystem: BangladeshIdentifierType
|
||||
Id: bangladesh-identifier-type-cs
|
||||
Id: bd-identifier-type
|
||||
Title: "Bangladesh Identifier Types"
|
||||
Description: "Codes identifying the type of identifiers used in Bangladesh."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-identifier-type"
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
|
||||
* #NID "National ID"
|
||||
* #BRN "Birth Registration Number"
|
||||
@@ -11,10 +14,10 @@ Title: "Bangladesh Identifier Types"
|
||||
|
||||
|
||||
ValueSet: BangladeshIdentifierTypeVS
|
||||
Id: bangladesh-identifier-type-vs
|
||||
Id: bd-identifier-type-valueset
|
||||
Title: "Bangladesh Identifier Type"
|
||||
Description: "Bangladesh Standard Identifier type"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-identifier-type"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-identifier-type-valueset"
|
||||
// * include codes from valueset http://hl7.org/fhir/ValueSet/identifier-type /// use name or uri
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-identifier-type
|
||||
|
||||
|
||||
@@ -4,6 +4,8 @@ Title: "Bangladesh Immunization Site Code System"
|
||||
Description: "Codes for anatomical site of vaccine administration in Bangladesh."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-immunization-site"
|
||||
* ^status = #active
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
* ^content = #complete
|
||||
|
||||
* #LA "Left Arm"
|
||||
|
||||
@@ -1,8 +1,10 @@
|
||||
CodeSystem: BDMedicationCodeSystem
|
||||
Id: bd-medication-cs
|
||||
Id: bd-medication-code
|
||||
Title: "Bangladesh Medication Codes"
|
||||
Description: "Bangladesh Medication Codes"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-medication-code"
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
// DGDA DAR Code "Brand Name"
|
||||
* #394-0010-030 "Tubutol" "Ethambutol"
|
||||
* #394-0011-030 "AFDCDT-2" "Isoniazid + Rifampicin"
|
||||
@@ -16,7 +18,7 @@ Description: "Bangladesh Medication Codes"
|
||||
// ValueSet for BD Medication
|
||||
// ---------------------------
|
||||
ValueSet: BDMedicationVS
|
||||
Id: bd-medication-vs
|
||||
Id: bd-medication-valueset
|
||||
Title: "Bangladesh Medication ValueSet"
|
||||
Description: "Bangladesh Medication ValueSet"
|
||||
* include codes from system BDMedicationCodeSystem
|
||||
|
||||
@@ -34,8 +34,8 @@ Description: "Medication dose form codes according to CCDS guideline"
|
||||
// ValueSet for BD Medication Dose Forms
|
||||
// ---------------------------
|
||||
ValueSet: BDMedicationDoseFormVS
|
||||
Id: bd-dose-form-vs
|
||||
Id: bd-dose-form-valueset
|
||||
Title: "Bangladesh Medication Dose Form ValueSet"
|
||||
Description: "Medication dose form value set according to CCDS guideline"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-dose-form-vs"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-dose-form-valueset"
|
||||
* include codes from system BDMedicationDoseForm
|
||||
@@ -1,6 +1,7 @@
|
||||
CodeSystem: BDOccupationsCS
|
||||
Id: bangladesh-occupations-cs
|
||||
Id: bd-occupations
|
||||
Title: "Bangladesh Occupations"
|
||||
Description: "Occupations code system according to CCDS guideline"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-occupations"
|
||||
|
||||
* #1 "Physical Scientists & Related Technicians" "ভৌত বিজ্ঞানী ও এতদসংক্রান্ত টেকনিশিয়ান"
|
||||
@@ -76,8 +77,8 @@ Title: "Bangladesh Occupations"
|
||||
* #92 "Printers and Related Workers" "মুদ্রণকাজ"
|
||||
|
||||
ValueSet: BDOccupationsVS
|
||||
Id: bd-occupations-vs
|
||||
Id: bd-occupations-valueset
|
||||
Title: "Bangladesh Occupations ValueSet"
|
||||
Description: "Occupations value set according to CCDS guideline"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-occupations"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-occupations-valueset"
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-occupations
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
//codeSystems/bd-regions.fsh
|
||||
CodeSystem: BDReligionsCS
|
||||
Id: bangladesh-religions-cs
|
||||
Id: bd-religions
|
||||
Title: "Bangladesh Religions"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-religions"
|
||||
|
||||
@@ -13,8 +13,8 @@ Title: "Bangladesh Religions"
|
||||
* #0 "Other (specify)" "Other religion (to be specified in free text)"
|
||||
|
||||
ValueSet: BDReligionsVS
|
||||
Id: bd-religions-vs
|
||||
Id: bd-religions-valueset
|
||||
Title: "Bangladesh Religions ValueSet"
|
||||
Description: "Religions value set according to CCDS guideline"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-religions"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-religions-valueset"
|
||||
* include codes from system https://fhir.dghs.gov.bd/core/CodeSystem/bd-religions
|
||||
|
||||
@@ -4,6 +4,8 @@ Title: "Bangladesh Vaccine Code System"
|
||||
Description: "Vaccine codes used in Bangladesh EPI and immunization program."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-vaccine-code"
|
||||
* ^status = #active
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
* ^content = #complete
|
||||
|
||||
* #BCG "BCG Vaccine"
|
||||
|
||||
@@ -4,6 +4,8 @@ Title: "Bangladesh Immunization Route Code System"
|
||||
Description: "Codes for routes of vaccine administration in Bangladesh."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/CodeSystem/bd-immunization-route"
|
||||
* ^status = #active
|
||||
* ^caseSensitive = true
|
||||
* ^experimental = false
|
||||
* ^content = #complete
|
||||
|
||||
* #IM "Intramuscular"
|
||||
|
||||
@@ -10,4 +10,4 @@ Description: "Nationality of the patient based on Bangladesh country list."
|
||||
|
||||
// Only one value, bound to your ValueSet
|
||||
* value[x] only CodeableConcept
|
||||
* valueCodeableConcept from https://fhir.dghs.gov.bd/core/ValueSet/bd-country-list (required)
|
||||
* valueCodeableConcept from https://fhir.dghs.gov.bd/core/ValueSet/bd-country-list-valueset (required)
|
||||
@@ -7,5 +7,5 @@ Context: Patient
|
||||
|
||||
// occupation using standard HL7 extension
|
||||
* value[x] only string
|
||||
* value[x] from https://fhir.dghs.gov.bd/core/ValueSet/bd-occupations (required)
|
||||
* value[x] from https://fhir.dghs.gov.bd/core/ValueSet/bd-occupations-valueset (required)
|
||||
|
||||
|
||||
@@ -7,28 +7,31 @@ Description: "Profile of Encounter Bangladesh Standard"
|
||||
|
||||
* identifier 1..*
|
||||
|
||||
* status 1..1 MS
|
||||
* status 1..1
|
||||
* status from BDEncounterStatusSubsetVS
|
||||
* status ^short = "Encounter status in BD"
|
||||
* status ^definition = "Status of patient encounter (planned, in-progress, finished, cancelled)"
|
||||
|
||||
* class 1..1 MS
|
||||
* class 1..1
|
||||
* class from BDEncounterClassSubsetVS
|
||||
|
||||
* subject 1..1 MS
|
||||
* subject 1..1
|
||||
//* subject from https://fhir.dghs.gov.bd/core/StructureDefinition/bd-patient
|
||||
|
||||
* basedOn 0..1 MS
|
||||
//* basedOn only Reference (CarePlan or DeviceRequest or MedicationRequest or ServiceRequest)
|
||||
|
||||
* partOf 0..1 MS
|
||||
|
||||
* serviceProvider 1..1 MS
|
||||
* serviceProvider 1..1
|
||||
|
||||
* participant 1..* MS
|
||||
* participant.period 1..1 MS
|
||||
* participant 1..*
|
||||
* participant.period 1..1
|
||||
|
||||
* diagnosis 0..* MS
|
||||
* diagnosis.condition only Reference(BDConditionProfile)
|
||||
|
||||
|
||||
//* admission 0..* MS
|
||||
//* admission.dischargeDisposition 0..1 MS
|
||||
//* encounter.admission.dischargeDisposition 0..1
|
||||
|
||||
|
||||
* hospitalization.dischargeDisposition 0..1 MS
|
||||
@@ -1,5 +1,3 @@
|
||||
|
||||
|
||||
// @Name: Profile
|
||||
// @Description: Immunization Profile of the Bangladeshi Patient.
|
||||
Profile: BDImmunizationProfile
|
||||
@@ -13,7 +11,6 @@ Description: "Bangladesh Immunization Profile"
|
||||
* identifier 1..*
|
||||
* identifier ^short = "Unique identifier"
|
||||
* identifier ^definition = "Unique identifier for the vaccination event"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/identifier/bd-immunization"
|
||||
|
||||
* reasonReference 0..*
|
||||
* reasonReference only Reference(Condition or Observation or DiagnosticReport)
|
||||
@@ -26,7 +23,7 @@ Description: "Bangladesh Immunization Profile"
|
||||
* manufacturer 0..1
|
||||
* manufacturer ^short = "Manufacturer"
|
||||
* manufacturer ^definition = "Vaccine manufacturer"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/StructureDefinition/bd-organization"
|
||||
* manufacturer only Reference(BDOrganization)
|
||||
|
||||
* lotNumber 0..1
|
||||
* lotNumber ^short = "Vaccine Lot Number"
|
||||
|
||||
@@ -51,7 +51,7 @@ Patient profile for Bangladesh.
|
||||
* identifier[NID].system = "http://dghs.gov.bd/identifier/nid"
|
||||
* identifier[NID].type.coding.code = #NID
|
||||
// * identifier[NID].type.coding.system = "http://terminology.hl7.org/CodeSystem/v2-0203"
|
||||
* identifier[NID].type.coding.system = "https://fhir.dghs.gov.bd/core/ValueSet/bd-identifier-type"
|
||||
* identifier[NID].type.coding.system = "https://fhir.dghs.gov.bd/core/ValueSet/bd-identifier-type-valueset"
|
||||
* identifier[NID].type from BangladeshIdentifierTypeVS (extensible)
|
||||
* identifier[NID].type.text = "Organization identifier"
|
||||
// * identifier[NID].value = "Personal identifier National ID"
|
||||
@@ -61,7 +61,7 @@ Patient profile for Bangladesh.
|
||||
|
||||
* identifier[BRN].system = "http://dghs.gov.bd/identifier/brn"
|
||||
* identifier[BRN].type.coding.code = #BRN
|
||||
* identifier[BRN].type.coding.system = "https://fhir.dghs.gov.bd/core/ValueSet/bd-identifier-type"
|
||||
* identifier[BRN].type.coding.system = "https://fhir.dghs.gov.bd/core/ValueSet/bd-identifier-type-valueset"
|
||||
* identifier[BRN].type from BangladeshIdentifierTypeVS (extensible)
|
||||
* identifier[BRN].type.text = "Organization identifier"
|
||||
// * identifier[BRN].value = "Personal identifier Birth Registration"
|
||||
@@ -69,7 +69,7 @@ Patient profile for Bangladesh.
|
||||
|
||||
* identifier[UHID].system = "http://dghs.gov.bd/identifier/uhid"
|
||||
* identifier[UHID].type.coding.code = #UHID
|
||||
* identifier[UHID].type.coding.system = "https://fhir.dghs.gov.bd/core/ValueSet/bd-identifier-type"
|
||||
* identifier[UHID].type.coding.system = "https://fhir.dghs.gov.bd/core/ValueSet/bd-identifier-type-valueset"
|
||||
* identifier[UHID].type from BangladeshIdentifierTypeVS (extensible)
|
||||
* identifier[UHID].type.text = "Organization identifier"
|
||||
|
||||
@@ -96,7 +96,7 @@ Patient profile for Bangladesh.
|
||||
|
||||
// Religion using standard HL7 extension
|
||||
* extension contains http://hl7.org/fhir/StructureDefinition/patient-religion named religion 0..1
|
||||
* extension[religion].valueCodeableConcept from https://fhir.dghs.gov.bd/core/ValueSet/bd-religions
|
||||
* extension[religion].valueCodeableConcept from https://fhir.dghs.gov.bd/core/ValueSet/bd-religions-valueset
|
||||
|
||||
* address 1..* MS
|
||||
* address only BDAddress
|
||||
|
||||
6
input/fsh/valueSets/BDConditionICD11VS.fsh
Normal file
6
input/fsh/valueSets/BDConditionICD11VS.fsh
Normal file
@@ -0,0 +1,6 @@
|
||||
ValueSet: BDConditionICD11VS
|
||||
Id: bd-condition-icd11-valueset
|
||||
Title: "Bangladesh ICD-11 MMS ValueSet"
|
||||
Description: "ValueSet that includes the ICD-11 MMS CodeSystem for Condition.code"
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-condition-icd11-valueset"
|
||||
* include codes from system http://id.who.int/icd/release/11/mms
|
||||
@@ -1,6 +1,6 @@
|
||||
// ---------- ValueSet ----------
|
||||
ValueSet: BDEncounterClassSubsetVS
|
||||
Id: bd-encounter-class-subset-vs
|
||||
Id: bd-encounter-class-subset
|
||||
Title: "BD Encounter Class Subset"
|
||||
Description: "Subset of EncounterClass limited to inpatient, ambulatory, and emergency."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-encounter-class-subset"
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
// ---------- ValueSet ----------
|
||||
ValueSet: BDEncounterStatusSubsetVS
|
||||
Id: bd-encounter-status-subset-vs
|
||||
Id: bd-encounter-status-subset
|
||||
Title: "BD Encounter Status Subset"
|
||||
Description: "Subset of EncounterStatus limited to planned, in-progress, finished, and cancelled."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-encounter-status-subset"
|
||||
|
||||
@@ -1,5 +1,5 @@
|
||||
ValueSet: BDImmunizationReactionValueSet
|
||||
Id: bd-immunization-reaction-vs
|
||||
Id: bd-immunization-reaction-valueset
|
||||
Title: "Bangladesh Immunization Reaction Value Set"
|
||||
Description: "Allowed vaccine reactions for immunization in Bangladesh."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-immunization-reaction-valueset"
|
||||
|
||||
@@ -1,5 +1,5 @@
|
||||
ValueSet: BDImmunizationRouteVS
|
||||
Id: bd-immunization-route-vs
|
||||
Id: bd-immunization-route-valueset
|
||||
Title: "Bangladesh Immunization Route Value Set"
|
||||
Description: "Allowed administration routes for vaccines in Bangladesh."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-immunization-route-valueset"
|
||||
|
||||
@@ -1,5 +1,5 @@
|
||||
ValueSet: BDImmunizationSiteVS
|
||||
Id: bd-immunization-site-vs
|
||||
Id: bd-immunization-site-valueset
|
||||
Title: "Bangladesh Immunization Site Value Set"
|
||||
Description: "Allowed administration sites for vaccines in Bangladesh."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-immunization-site-valueset"
|
||||
|
||||
@@ -1,6 +1,8 @@
|
||||
ValueSet: BDLanguageVS
|
||||
Id: bd-language-vs
|
||||
Id: bd-language-valueset
|
||||
Title: "Allowed Languages"
|
||||
Description: "Only English and Bengali are allowed"
|
||||
* http://hl7.org/fhir/ValueSet/languages#en "English"
|
||||
* http://hl7.org/fhir/ValueSet/languages#bn "Bengali"
|
||||
* urn:ietf:bcp:47#en "English"
|
||||
* urn:ietf:bcp:47#bn "Bengali"
|
||||
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-language-valueset"
|
||||
|
||||
@@ -1,5 +1,5 @@
|
||||
ValueSet: BDVaccineVS
|
||||
Id: bd-vaccine-vs
|
||||
Id: bd-vaccine-valueset
|
||||
Title: "Bangladesh Vaccine Value Set"
|
||||
Description: "Allowed vaccines for immunization in Bangladesh."
|
||||
* ^url = "https://fhir.dghs.gov.bd/core/ValueSet/bd-vaccine-valueset"
|
||||
|
||||
BIN
input/images/bd-core-architecture.png
Normal file
BIN
input/images/bd-core-architecture.png
Normal file
Binary file not shown.
|
After Width: | Height: | Size: 347 KiB |
@@ -38,4 +38,6 @@
|
||||
</li>
|
||||
</ul>
|
||||
</li>
|
||||
<li><a href="https://pdb.shrlive.dghs.gov.bd">SHR Dashboard</a></li>
|
||||
<li><a href="https://en.info.shr.dghs.gov.bd">Learn More</a></li>
|
||||
</ul>
|
||||
|
||||
@@ -1,10 +1,34 @@
|
||||
<div xmlns="http://www.w3.org/1999/xhtml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R5/fhir-single.xsd">
|
||||
<h3>Heading 1</h3>
|
||||
<p>
|
||||
Some text
|
||||
The Bangladesh Core FHIR Implementation Guide defines national base
|
||||
profiles, code systems, and value sets to ensure interoperability across
|
||||
digital health systems under DGHS and MoHFW.
|
||||
</p>
|
||||
<h3>Heading 2</h3>
|
||||
|
||||
<h3>Motivation</h3>
|
||||
<p>
|
||||
<img height="600" src="anImage.png" alt="A sample image"/>
|
||||
Bangladesh has multiple health information systems developed over the
|
||||
years, including DHIS2, multiple hospital automation systems, field automation systems, and HRIS. These systems use different data
|
||||
standards, which makes interoperability difficult. This guide aligns
|
||||
national systems with HL7® FHIR® R4 to ensure semantic consistency and
|
||||
facilitate integration with global initiatives.
|
||||
</p>
|
||||
|
||||
<h3>Scope</h3>
|
||||
<ul>
|
||||
<li>Patient identity management (UHID, NID, BRN)</li>
|
||||
<li>Health facility and organization registry</li>
|
||||
<li>Immunization, laboratory, and condition profiles</li>
|
||||
<li>Terminology services (ICD-11, SNOMED subsets, local CodeSystems)</li>
|
||||
</ul>
|
||||
|
||||
<h3>National Digital Health Architecture</h3>
|
||||
<p>
|
||||
The following diagram shows how FHIR-based services are integrated into
|
||||
Bangladesh's national digital health architecture:
|
||||
</p>
|
||||
<p>
|
||||
<img src="bd-core-architecture.png" alt="Bangladesh Digital Health Architecture" style="max-width:100%; height:auto"/>
|
||||
</p>
|
||||
</div>
|
||||
|
||||
|
||||
14
input/publication-request.json
Normal file
14
input/publication-request.json
Normal file
@@ -0,0 +1,14 @@
|
||||
{
|
||||
"package-id": "bd.fhir.core",
|
||||
"version": "0.2.0",
|
||||
"path": "https://fhir.dghs.gov.bd/core/0.2.0",
|
||||
"mode": "working",
|
||||
"status": "trial-use",
|
||||
"sequence": "STU1",
|
||||
"desc": "First draft release of the Bangladesh Core FHIR Implementation Guide",
|
||||
"descmd": "# Bangladesh Core FHIR IG - Release 0.2.0\n\nThis is the first draft release of the Bangladesh Core FHIR Implementation Guide. It defines national base profiles, value sets, and extensions for health data interoperability in Bangladesh.\n\n## Key Features\n- Base profiles for common FHIR resources\n- National value sets and code systems\n- Extensions for Bangladesh-specific requirements\n\n## Status\nThis is a trial-use release. Implementers are encouraged to provide feedback.",
|
||||
"first": true,
|
||||
"category": "National Base",
|
||||
"ci-build": "https://fhir.dghs.gov.bd/core/",
|
||||
"package-list": "https://fhir.dghs.gov.bd/core/package-list.json"
|
||||
}
|
||||
33
package-feed.xml
Normal file
33
package-feed.xml
Normal file
@@ -0,0 +1,33 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<feed xmlns="http://www.w3.org/2005/Atom">
|
||||
<id>https://fhir.dghs.gov.bd/core/package-feed.xml</id>
|
||||
<title>Bangladesh Core FHIR IG Package Feed</title>
|
||||
<subtitle>FHIR Package Feed for bd.fhir.core</subtitle>
|
||||
<link rel="self" href="https://fhir.dghs.gov.bd/core/package-feed.xml"/>
|
||||
<link rel="alternate" href="https://fhir.dghs.gov.bd/core/"/>
|
||||
<updated>2025-10-02T00:00:00Z</updated>
|
||||
<author>
|
||||
<name>MIS, Directorate General of Health Services (DGHS), Bangladesh</name>
|
||||
<uri>https://dghs.gov.bd</uri>
|
||||
</author>
|
||||
|
||||
<!-- Entries will be automatically added by the CI/CD pipeline -->
|
||||
<!-- Example entry structure (will be generated): -->
|
||||
<!--
|
||||
<entry>
|
||||
<title>bd.fhir.core version 0.2.0</title>
|
||||
<link rel="alternate" href="https://fhir.dghs.gov.bd/core/0.2.0/"/>
|
||||
<id>https://fhir.dghs.gov.bd/core/0.2.0/</id>
|
||||
<updated>2025-10-02T00:00:00Z</updated>
|
||||
<summary>Release 0.2.0 of Bangladesh Core FHIR Implementation Guide</summary>
|
||||
</entry>
|
||||
-->
|
||||
|
||||
<entry>
|
||||
<title>bd.fhir.core version 0.2.0</title>
|
||||
<link rel="alternate" href="https://fhir.dghs.gov.bd/core/0.2.0/"/>
|
||||
<id>https://fhir.dghs.gov.bd/core/0.2.0/</id>
|
||||
<updated>2025-10-02T00:00:00Z</updated>
|
||||
<summary>First draft release of Bangladesh Core FHIR Implementation Guide</summary>
|
||||
</entry>
|
||||
</feed>
|
||||
23
package-list.backup
Normal file
23
package-list.backup
Normal file
@@ -0,0 +1,23 @@
|
||||
{
|
||||
"package-id": "bd.fhir.core",
|
||||
"title": "Bangladesh Core FHIR Implementation Guide",
|
||||
"canonical": "https://fhir.dghs.gov.bd",
|
||||
"introduction": "The Bangladesh Core FHIR IG defines national base profiles, value sets, and extensions for health data interoperability.",
|
||||
"list": [
|
||||
{
|
||||
"version": "current",
|
||||
"desc": "Continuous Integration Build (latest development version)",
|
||||
"path": "https://fhir.dghs.gov.bd/build",
|
||||
"status": "ci-build",
|
||||
"current": true
|
||||
},
|
||||
{
|
||||
"version": "v0.2.0",
|
||||
"date": "2025-10-02",
|
||||
"desc": "First draft release of the Bangladesh Core FHIR IG.",
|
||||
"path": "https://fhir.dghs.gov.bd/v0.2.0",
|
||||
"status": "trial-use",
|
||||
"sequence": "STU 1"
|
||||
}
|
||||
]
|
||||
}
|
||||
@@ -1,20 +1,23 @@
|
||||
{
|
||||
"package-id" : "hl7.fhir.uv.myig",
|
||||
"title" : "Your User Friendly Name for MyIG Here",
|
||||
"canonical" : "http://hl7.org/fhir/uv/myig",
|
||||
"introduction" : "The introduction that should appear in the FHIR IG registry",
|
||||
"list" : [{
|
||||
"package-id": "bd.fhir.core",
|
||||
"title": "Bangladesh Core FHIR Implementation Guide",
|
||||
"canonical": "https://fhir.dghs.gov.bd/core/",
|
||||
"introduction": "The Bangladesh Core FHIR IG defines national base profiles, value sets, and extensions for health data interoperability.",
|
||||
"list": [
|
||||
{
|
||||
"version": "current",
|
||||
"desc" : "Continuous Integration Build (latest in version control)",
|
||||
"path" : "http://hl7.org/fhir/ig/HL7/myig",
|
||||
"desc": "Continuous Integration Build (latest in development)",
|
||||
"path": "https://fhir.dghs.gov.bd/core/",
|
||||
"status": "ci-build",
|
||||
"current": true
|
||||
},{
|
||||
"version" : "0.1.0",
|
||||
"date" : "2099-01-01",
|
||||
"desc" : "Initial STU ballot (Mmm yyyy Ballot)",
|
||||
"path" : "http://hl7.org/fhir/yyyyMmm/myig.html",
|
||||
"status" : "ballot",
|
||||
"sequence" : "DSTU 1"
|
||||
}]
|
||||
},
|
||||
{
|
||||
"version": "0.2.0",
|
||||
"date": "2025-10-02",
|
||||
"desc": "First draft release of the Bangladesh Core FHIR IG",
|
||||
"path": "https://fhir.dghs.gov.bd/core/0.2.0/",
|
||||
"status": "trial-use",
|
||||
"sequence": "STU 1"
|
||||
}
|
||||
]
|
||||
}
|
||||
12
publication-request.backup
Normal file
12
publication-request.backup
Normal file
@@ -0,0 +1,12 @@
|
||||
{
|
||||
"package-id": "bd.fhir.core",
|
||||
"title": "Bangladesh Core FHIR Implementation Guide",
|
||||
"canonical": "https://fhir.dghs.gov.bd",
|
||||
"version": "0.2.0",
|
||||
"path": "https://fhir.dghs.gov.bd",
|
||||
"status": "trial-use",
|
||||
"sequence": "STU 1",
|
||||
"mode": "milestone",
|
||||
"desc": "First draft release of the Bangladesh Core FHIR IG.",
|
||||
"first": true
|
||||
}
|
||||
Reference in New Issue
Block a user