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Clean up QA issues

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This commit is contained in:
Lloyd McKenzie 2021-04-29 22:30:42 -06:00
parent 3e6623ddba
commit 240d0966e4
12 changed files with 6823 additions and 3246 deletions
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9793
input-cache/schemas/R5/fhir-single.xsd
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83
input-cache/txcache/all-systems.cache
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@ -1,23 +1,4 @@
-------------------------------------------------------------------------------------
{"code" : {
"code" : "http://hl7.org/fhirpath/System.String"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "http://hl7.org/fhir/data-types"
},
{
"system" : "http://hl7.org/fhir/resource-types"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "",
"severity" : "error",
"error" : "The code system \"\" is not known (encountered paired with code = \"http://hl7.org/fhirpath/System.String\"); The code provided (#http://hl7.org/fhirpath/System.String) is not valid in the value set FHIRDefinedType"
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "text/cql"
}, "valueSet" :{
@ -50,22 +31,6 @@ v: {
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "application/pdf"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:ietf:bcp:13"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "application/pdf",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "application/elm+json"
}, "valueSet" :{
@ -82,3 +47,51 @@ v: {
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "image/png"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:ietf:bcp:13"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "image/png",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "text/x-sql"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:ietf:bcp:13"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "text/x-sql",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"code" : "application/pdf"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:ietf:bcp:13"
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "application/pdf",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------

54
input-cache/txcache/http___unstats.un.org_unsd_methods_m49_m49.htm.cache
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@ -1,4 +1,14 @@
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}, "valueSet" :null, "lang":"en-US", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "World",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
@ -16,9 +26,37 @@
}
}, "lang":"null", "useServer":"true", "useClient":"false", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "",
"severity" : "error",
"error" : "Not done yet @ TAreaCodeServices.Close"
"display" : "World",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}, "valueSet" :{
"resourceType" : "ValueSet",
"compose" : {
"include" : [{
"system" : "urn:iso:std:iso:3166"
},
{
"system" : "urn:iso:std:iso:3166:-2"
},
{
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"filter" : [{
"property" : "class",
"op" : "=",
"value" : "region"
}]
}]
}
}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"NO_MEMBERSHIP_CHECK"}####
v: {
"display" : "World",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
@ -31,13 +69,3 @@ v: {
"error" : ""
}
-------------------------------------------------------------------------------------
{"code" : {
"system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code" : "001"
}, "valueSet" :null, "lang":"en-US", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
v: {
"display" : "World",
"severity" : null,
"error" : ""
}
-------------------------------------------------------------------------------------

2
input-cache/txcache/version.ctl
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@ -1 +1 @@
1.0.329
1.9.372

5
input/examples/Library-example.json
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@ -3,17 +3,18 @@
"id": "example",
"url" : "http://somewhere.org/fhir/uv/myig/Library/example",
"version" : "1.0.0",
"name": "example",
"name": "Example",
"title": "Example CQL Library",
"status" : "draft",
"experimental": true,
"description": "Some example library",
"type" : {
"coding" : [{
"system" : "http://terminology.hl7.org/CodeSystem/library-type",
"code" : "logic-library"
}]
},
"subject": {
"subjectCodeableConcept": {
"coding": [{
"system": "hl7.org/fhir/resource-types",
"code": "Patient"

9
input/history/h1.json
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@ -10,6 +10,7 @@
"id" : "h1-1",
"target" : [ { "reference" : "StructureDefinition/myObservation" } ],
"occurredDateTime" : "2015-11-30",
"recorded" : "2020-01-01T00:00:00.000Z",
"reason" : [
{
"text" : "Add \"conductible\" property to ActRelationshipType and ParticipationType codes.for ContextConduction RIM Change. And create Concept domain CodeSystem and ValueSet for ContextConductionStyle"
@ -24,19 +25,19 @@
"agent" : [
{
"type" : {
"coding" : {
"coding" : [{
"system" : "http://terminology.hl7.org/CodeSystem/provenance-participant-type",
"code" : "author"
}
}]
},
"who" : { "display" : "Rob Hausam" }
},
{
"type" : {
"coding" : {
"coding" : [{
"system" : "http://terminology.hl7.org/CodeSystem/provenance-participant-type",
"code" : "verifier"
}
}]
},
"who" : { "display" : "Vocab" }
}

22
input/ignoreWarnings.txt
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@ -3,13 +3,27 @@
# Add warning and/or information messages here after you've confirmed that they aren't really a problem
# (And include comments like this justifying why)
# We expect that all of the 'structural' resources will only be validated against their respective 'core' resource definitions
Validate resource against profile http://hl7.org/fhir/StructureDefinition/ImplementationGuide
Validate resource against profile http://hl7.org/fhir/StructureDefinition/Library
Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet
Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition
# Have verified that these examples are being checked against the expected profiles/resources.
INFORMATION: Binary/example: Binary/example: Binary: Validate resource against profile http://hl7.org/fhir/StructureDefinition/Binary
INFORMATION: Patient/example: Patient/example: Patient: Validate resource against profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
# This is inherited from the base resource
WARNING: StructureDefinition/myObservation: StructureDefinition.snapshot.element[15].mapping[3].map: value should not start or finish with whitespace
# We're expecting these to not match the slice - we're showing how you can use slicing to define the one repetition you want even when many repetitions might be present
INFORMATION: Patient/example: Patient.name[0]: This element does not match any known slice defined in the profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
INFORMATION: Patient/example: Patient.name[1]: This element does not match any known slice defined in the profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
INFORMATION: Patient/example: Patient/example: Patient.name[0]: This element does not match any known slice defined in the profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
INFORMATION: Patient/example: Patient/example: Patient.name[1]: This element does not match any known slice defined in the profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
# If this was a real IG, there should be examples for these profiles too. But it's not, and I'm lazy...
WARNING: http://somewhere.org/fhir/uv/myig/StructureDefinition/myObservation: The Implementation Guide contains no examples for this profile
WARNING: http://somewhere.org/fhir/uv/myig/StructureDefinition/mypractitioner: The Implementation Guide contains no examples for this profile
WARNING: StructureDefinition.where(url = 'http://somewhere.org/fhir/uv/myig/StructureDefinition/mypractitioner'): The Implementation Guide contains no examples for this profile
WARNING: StructureDefinition.where(url = 'http://somewhere.org/fhir/uv/myig/StructureDefinition/myObservation'): The Implementation Guide contains no examples for this profile
# The objective is to show a reference to an unknown code system, so these warnings are expected
WARNING: ValueSet/valueset-no-codesystem: ValueSet/valueset-no-codesystem: ValueSet.compose[0].include[0]: Unknown System/Version specified, so Concepts and Filters can''t be checked
WARNING: ValueSet.where(id = 'valueset-no-codesystem'): Error from server: Unable to provide support for code system http://not-a-known-code-system

11
input/myig.xml
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@ -38,11 +38,11 @@
<license value="CC0-1.0"/>
<!-- This is whatever FHIR version(s) the IG artifacts are targeting (not the version of this file, which should always be 'current release') -->
<fhirVersion value="4.0.1"/>
<dependsOn>
<!-- <dependsOn>
<uri value="https://simplifier.net/packages/de.medizininformatikinitiative.kerndatensatz.fall/0.9.1/files/131317"/>
<packageId value="de.medizininformatikinitiative.kerndatensatz.fall"/>
<version value="0.9.1"/>
</dependsOn>
</dependsOn>-->
<definition>
<!-- You don't need to define any groupings. The IGPublisher will define them for you. You only need to do so if your IG is 'special' and it's
inappropriate to use the defaults. Feel free to provide feedback about the defaults... -->
@ -77,6 +77,13 @@
<description value="A simple example showing how examples are defined and referenced"/>
<exampleCanonical value="http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient"/>
</resource>
<resource>
<reference>
<reference value="Binary/example"/>
</reference>
<name value="Example binary"/>
<description value="Example showing binary content"/>
</resource>
<resource>
<reference>
<reference value="ValueSet/valueset-no-codesystem"/>

9
input/resources/library-example-image.xml
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8
input/resources/library-example-sql.xml
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@ -1,11 +1,17 @@
<?xml version="1.0" encoding="UTF-8"?>
<Library xmlns="http://hl7.org/fhir">
<Library xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R4/fhir-single.xsd">
<url value="http://somewhere.org/fhir/uv/myig/Library/example-sql"/>
<version value="1.0.0"/>
<name value="ExampleLibrary"/>
<title value="Example Library"/>
<status value="draft"/>
<experimental value="true"/>
<type>
<coding>
<system value="http://terminology.hl7.org/CodeSystem/library-type"/>
<code value="asset-collection"/>
</coding>
</type>
<date value="2020-05-15T00:00:00.000+10:00"/>
<content>
<contentType value="text/x-sql"/>

3
input/resources/myObservation.xml
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@ -1,5 +1,5 @@
<?xml version="1.0" encoding="UTF-8"?>
<StructureDefinition xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R5/fhir-single.xsd">
<StructureDefinition xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R4/fhir-single.xsd">
<id value="myObservation"/>
<url value="http://somewhere.org/fhir/uv/myig/StructureDefinition/myObservation"/>
<name value="MyObservation"/>
@ -50,6 +50,7 @@
</extension>
</targetProfile>
</type>
<mustSupport value="true"/>
</element>
<element id="Observation.focus">
<path value="Observation.focus"/>

6
input/resources/valueset-no-codesystem.xml
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@ -1,7 +1,9 @@
<ValueSet xmlns="http://hl7.org/fhir">
<?xml version="1.0" encoding="UTF-8"?>
<ValueSet xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R4/fhir-single.xsd">
<id value="valueset-no-codesystem"/>
<url value="http://somewhere.org/fhir/uv/myig/ValueSet/valueset-no-codesystem"/>
<name value="ValueSetWithNoCodeSystem"/>
<title value="ValueSet with no code-system"/>
<status value="draft"/>
<experimental value="true"/>
<date value="2015-06-22"/>
@ -13,7 +15,7 @@
<code value="not-known-code"/>
</concept>
<concept>
<code value="not-known-code"/>
<code value="not-known-code2"/>
</concept>
</include>
</compose>