Clean up QA issues

input-cache/txcache/all-systems.cache

@@ -1,23 +1,4 @@
 -------------------------------------------------------------------------------------
-{"code" : {
-  "code" : "http://hl7.org/fhirpath/System.String"
-}, "valueSet" :{
-  "resourceType" : "ValueSet",
-  "compose" : {
-    "include" : [{
-      "system" : "http://hl7.org/fhir/data-types"
-    },
-    {
-      "system" : "http://hl7.org/fhir/resource-types"
-    }]
-  }
-}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
-v: {
-  "display" : "",
-  "severity" : "error",
-  "error" : "The code system \"\" is not known (encountered paired with code = \"http://hl7.org/fhirpath/System.String\"); The code provided (#http://hl7.org/fhirpath/System.String) is not  valid in the value set FHIRDefinedType"
-}
--------------------------------------------------------------------------------------
 {"code" : {
   "code" : "text/cql"
 }, "valueSet" :{
@@ -50,22 +31,6 @@ v: {
   "error" : ""
 }
 -------------------------------------------------------------------------------------
-{"code" : {
-  "code" : "application/pdf"
-}, "valueSet" :{
-  "resourceType" : "ValueSet",
-  "compose" : {
-    "include" : [{
-      "system" : "urn:ietf:bcp:13"
-    }]
-  }
-}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
-v: {
-  "display" : "application/pdf",
-  "severity" : null,
-  "error" : ""
-}
--------------------------------------------------------------------------------------
 {"code" : {
   "code" : "application/elm+json"
 }, "valueSet" :{
@@ -82,3 +47,51 @@ v: {
   "error" : ""
 }
 -------------------------------------------------------------------------------------
+{"code" : {
+  "code" : "image/png"
+}, "valueSet" :{
+  "resourceType" : "ValueSet",
+  "compose" : {
+    "include" : [{
+      "system" : "urn:ietf:bcp:13"
+    }]
+  }
+}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
+v: {
+  "display" : "image/png",
+  "severity" : null,
+  "error" : ""
+}
+-------------------------------------------------------------------------------------
+{"code" : {
+  "code" : "text/x-sql"
+}, "valueSet" :{
+  "resourceType" : "ValueSet",
+  "compose" : {
+    "include" : [{
+      "system" : "urn:ietf:bcp:13"
+    }]
+  }
+}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
+v: {
+  "display" : "text/x-sql",
+  "severity" : null,
+  "error" : ""
+}
+-------------------------------------------------------------------------------------
+{"code" : {
+  "code" : "application/pdf"
+}, "valueSet" :{
+  "resourceType" : "ValueSet",
+  "compose" : {
+    "include" : [{
+      "system" : "urn:ietf:bcp:13"
+    }]
+  }
+}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"true", "valueSetMode":"ALL_CHECKS"}####
+v: {
+  "display" : "application/pdf",
+  "severity" : null,
+  "error" : ""
+}
+-------------------------------------------------------------------------------------

input-cache/txcache/http___unstats.un.org_unsd_methods_m49_m49.htm.cache

@@ -1,4 +1,14 @@
 -------------------------------------------------------------------------------------
+{"code" : {
+  "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
+  "code" : "001"
+}, "valueSet" :null, "lang":"en-US", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
+v: {
+  "display" : "World",
+  "severity" : null,
+  "error" : ""
+}
+-------------------------------------------------------------------------------------
 {"code" : {
   "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
   "code" : "001"
@@ -16,9 +26,37 @@
   }
 }, "lang":"null", "useServer":"true", "useClient":"false", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
 v: {
-  "display" : "",
+  "display" : "World",
-  "severity" : "error",
+  "severity" : null,
-  "error" : "Not done yet @ TAreaCodeServices.Close"
+  "error" : ""
+}
+-------------------------------------------------------------------------------------
+{"code" : {
+  "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
+  "code" : "001"
+}, "valueSet" :{
+  "resourceType" : "ValueSet",
+  "compose" : {
+    "include" : [{
+      "system" : "urn:iso:std:iso:3166"
+    },
+    {
+      "system" : "urn:iso:std:iso:3166:-2"
+    },
+    {
+      "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
+      "filter" : [{
+        "property" : "class",
+        "op" : "=",
+        "value" : "region"
+      }]
+    }]
+  }
+}, "lang":"null", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"NO_MEMBERSHIP_CHECK"}####
+v: {
+  "display" : "World",
+  "severity" : null,
+  "error" : ""
 }
 -------------------------------------------------------------------------------------
 {"code" : {
@@ -31,13 +69,3 @@ v: {
   "error" : ""
 }
 -------------------------------------------------------------------------------------
-{"code" : {
-  "system" : "http://unstats.un.org/unsd/methods/m49/m49.htm",
-  "code" : "001"
-}, "valueSet" :null, "lang":"en-US", "useServer":"true", "useClient":"true", "guessSystem":"false", "valueSetMode":"ALL_CHECKS"}####
-v: {
-  "display" : "World",
-  "severity" : null,
-  "error" : ""
-}
--------------------------------------------------------------------------------------

input-cache/txcache/version.ctl

@@ -1 +1 @@
-1.0.329
+1.9.372

input/examples/Library-example.json

@@ -3,17 +3,18 @@
   "id": "example",
   "url" : "http://somewhere.org/fhir/uv/myig/Library/example",
   "version" : "1.0.0",
-  "name": "example",
+  "name": "Example",
   "title": "Example CQL Library",
   "status" : "draft",
   "experimental": true,
+  "description": "Some example library",
   "type" : {
     "coding" : [{
       "system" : "http://terminology.hl7.org/CodeSystem/library-type",
       "code" : "logic-library"
     }]
   },
-  "subject": {
+  "subjectCodeableConcept": {
     "coding": [{
       "system": "hl7.org/fhir/resource-types",
       "code": "Patient"

input/history/h1.json

@@ -10,6 +10,7 @@
         "id" : "h1-1",
         "target" : [ { "reference" : "StructureDefinition/myObservation" } ],
         "occurredDateTime" : "2015-11-30",
+        "recorded" : "2020-01-01T00:00:00.000Z",
         "reason" : [
           {
             "text" : "Add \"conductible\" property to ActRelationshipType and ParticipationType codes.for ContextConduction RIM Change. And create Concept domain CodeSystem and ValueSet for ContextConductionStyle"
@@ -24,19 +25,19 @@
         "agent" : [
           {
             "type" : {
-              "coding" : {
+              "coding" : [{
                 "system" : "http://terminology.hl7.org/CodeSystem/provenance-participant-type",
                 "code" : "author"
-              }
+              }]
             },
             "who" : { "display" : "Rob Hausam" }
           },
           {
             "type" : {
-              "coding" : {
+              "coding" : [{
                 "system" : "http://terminology.hl7.org/CodeSystem/provenance-participant-type",
                 "code" : "verifier"
-              }
+              }]
             },
             "who" : { "display" : "Vocab" }
           }

input/ignoreWarnings.txt

@@ -3,13 +3,27 @@
 # Add warning and/or information messages here after you've confirmed that they aren't really a problem
 # (And include comments like this justifying why)
 
+# We expect that all of the 'structural' resources will only be validated against their respective 'core' resource definitions
+Validate resource against profile http://hl7.org/fhir/StructureDefinition/ImplementationGuide
+Validate resource against profile http://hl7.org/fhir/StructureDefinition/Library
+Validate resource against profile http://hl7.org/fhir/StructureDefinition/ValueSet
+Validate resource against profile http://hl7.org/fhir/StructureDefinition/StructureDefinition
+
+# Have verified that these examples are being checked against the expected profiles/resources.
+INFORMATION: Binary/example: Binary/example: Binary: Validate resource against profile http://hl7.org/fhir/StructureDefinition/Binary
+INFORMATION: Patient/example: Patient/example: Patient: Validate resource against profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
+
 # This is inherited from the base resource
 WARNING: StructureDefinition/myObservation: StructureDefinition.snapshot.element[15].mapping[3].map: value should not start or finish with whitespace
 
 # We're expecting these to not match the slice - we're showing how you can use slicing to define the one repetition you want even when many repetitions might be present
-INFORMATION: Patient/example: Patient.name[0]: This element does not match any known slice defined in the profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
+INFORMATION: Patient/example: Patient/example: Patient.name[0]: This element does not match any known slice defined in the profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
-INFORMATION: Patient/example: Patient.name[1]: This element does not match any known slice defined in the profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
+INFORMATION: Patient/example: Patient/example: Patient.name[1]: This element does not match any known slice defined in the profile http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient
 
 # If this was a real IG, there should be examples for these profiles too.  But it's not, and I'm lazy...
-WARNING: http://somewhere.org/fhir/uv/myig/StructureDefinition/myObservation: The Implementation Guide contains no examples for this profile
+WARNING: StructureDefinition.where(url = 'http://somewhere.org/fhir/uv/myig/StructureDefinition/mypractitioner'): The Implementation Guide contains no examples for this profile
-WARNING: http://somewhere.org/fhir/uv/myig/StructureDefinition/mypractitioner: The Implementation Guide contains no examples for this profile
+WARNING: StructureDefinition.where(url = 'http://somewhere.org/fhir/uv/myig/StructureDefinition/myObservation'): The Implementation Guide contains no examples for this profile
+
+# The objective is to show a reference to an unknown code system, so these warnings are expected
+WARNING: ValueSet/valueset-no-codesystem: ValueSet/valueset-no-codesystem: ValueSet.compose[0].include[0]: Unknown System/Version specified, so Concepts and Filters can''t be checked
+WARNING: ValueSet.where(id = 'valueset-no-codesystem'): Error from server: Unable to provide support for code system http://not-a-known-code-system

input/myig.xml

@@ -38,11 +38,11 @@
   <license value="CC0-1.0"/>
   <!-- This is whatever FHIR version(s) the IG artifacts are targeting (not the version of this file, which should always be 'current release') -->
   <fhirVersion value="4.0.1"/>
-  <dependsOn>
+<!--  <dependsOn>
     <uri value="https://simplifier.net/packages/de.medizininformatikinitiative.kerndatensatz.fall/0.9.1/files/131317"/>
     <packageId value="de.medizininformatikinitiative.kerndatensatz.fall"/>
     <version value="0.9.1"/>
-  </dependsOn>
+  </dependsOn>-->
   <definition>
     <!-- You don't need to define any groupings.  The IGPublisher will define them for you.  You only need to do so if your IG is 'special' and it's
       inappropriate to use the defaults.  Feel free to provide feedback about the defaults... -->
@@ -77,6 +77,13 @@
       <description value="A simple example showing how examples are defined and referenced"/>
       <exampleCanonical value="http://somewhere.org/fhir/uv/myig/StructureDefinition/mypatient"/>
     </resource>
+    <resource>
+      <reference>
+        <reference value="Binary/example"/>
+      </reference>
+      <name value="Example binary"/>
+      <description value="Example showing binary content"/>
+    </resource>
     <resource>
       <reference>
         <reference value="ValueSet/valueset-no-codesystem"/>

input/resources/library-example-sql.xml

@@ -1,11 +1,17 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<Library xmlns="http://hl7.org/fhir">
+<Library xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R4/fhir-single.xsd">
   <url value="http://somewhere.org/fhir/uv/myig/Library/example-sql"/>
   <version value="1.0.0"/>
   <name value="ExampleLibrary"/>
   <title value="Example Library"/>
   <status value="draft"/>
   <experimental value="true"/>
+  <type>
+    <coding>
+      <system value="http://terminology.hl7.org/CodeSystem/library-type"/>
+      <code value="asset-collection"/>
+    </coding>
+  </type>
   <date value="2020-05-15T00:00:00.000+10:00"/>
   <content>
     <contentType value="text/x-sql"/>

input/resources/myObservation.xml

@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<StructureDefinition xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R5/fhir-single.xsd">
+<StructureDefinition xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R4/fhir-single.xsd">
   <id value="myObservation"/>
   <url value="http://somewhere.org/fhir/uv/myig/StructureDefinition/myObservation"/>
   <name value="MyObservation"/>
@@ -50,6 +50,7 @@
           </extension>
         </targetProfile>
       </type>
+      <mustSupport value="true"/>
     </element>
     <element id="Observation.focus">
       <path value="Observation.focus"/>

input/resources/valueset-no-codesystem.xml

@@ -1,20 +1,22 @@
-<ValueSet xmlns="http://hl7.org/fhir">
+<?xml version="1.0" encoding="UTF-8"?>
-  <id value="valueset-no-codesystem"/> 
+<ValueSet xmlns="http://hl7.org/fhir" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hl7.org/fhir ../../input-cache/schemas/R4/fhir-single.xsd">
-  <url value="http://somewhere.org/fhir/uv/myig/ValueSet/valueset-no-codesystem"/> 
+  <id value="valueset-no-codesystem"/>
+  <url value="http://somewhere.org/fhir/uv/myig/ValueSet/valueset-no-codesystem"/>
   <name value="ValueSetWithNoCodeSystem"/>
-  <status value="draft"/> 
+  <title value="ValueSet with no code-system"/>
-  <experimental value="true"/> 
+  <status value="draft"/>
-  <date value="2015-06-22"/> 
+  <experimental value="true"/>
-  <compose> 
+  <date value="2015-06-22"/>
-    <include> 
+  <compose>
-      <system value="http://not-a-known-code-system"/> 
+    <include>
-      <version value="2.36"/> 
+      <system value="http://not-a-known-code-system"/>
-      <concept> 
+      <version value="2.36"/>
-        <code value="not-known-code"/> 
+      <concept>
-      </concept> 
+        <code value="not-known-code"/>
-      <concept> 
+      </concept>
-        <code value="not-known-code"/> 
+      <concept>
-      </concept> 
+        <code value="not-known-code2"/>
-    </include> 
+      </concept>
-  </compose> 
+    </include>
-</ValueSet> 
+  </compose>
+</ValueSet>