152 lines
9.7 KiB
MySQL
152 lines
9.7 KiB
MySQL
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SELECT
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first_answers.answer_name AS 'Type of Diarrhoea',
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second_answers.answer_name AS 'Symptoms of Diarrhoea',
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gender.gender AS Gender,
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rag.name AS 'Age group',
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sum(CASE WHEN first_concept.answer IS NOT NULL AND second_concept.answer IS NOT NULL AND p.gender IS NOT NULL THEN 1
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ELSE 0 END) AS 'Patient Count'
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FROM
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(SELECT
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ca.answer_concept AS answer,
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ifnull(answer_concept_short_name.name, answer_concept_fully_specified_name.name) AS answer_name
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FROM concept c
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INNER JOIN concept_datatype cd ON c.datatype_id = cd.concept_datatype_id
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INNER JOIN concept_name question_concept_name ON c.concept_id = question_concept_name.concept_id
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AND question_concept_name.concept_name_type = 'FULLY_SPECIFIED'
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AND
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question_concept_name.voided IS FALSE
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INNER JOIN concept_answer ca ON c.concept_id = ca.concept_id
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INNER JOIN concept_name answer_concept_fully_specified_name
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ON ca.answer_concept = answer_concept_fully_specified_name.concept_id
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AND answer_concept_fully_specified_name.concept_name_type = 'FULLY_SPECIFIED' AND
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answer_concept_fully_specified_name.voided IS FALSE
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LEFT JOIN concept_name answer_concept_short_name ON ca.answer_concept = answer_concept_short_name.concept_id
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AND answer_concept_short_name.concept_name_type = 'SHORT' AND
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answer_concept_short_name.voided IS FALSE
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WHERE question_concept_name.name = 'Diarrhoea,Type of Diarrhoea' AND cd.name = 'Coded'
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UNION
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SELECT
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answer_concept_fully_specified_name.concept_id AS answer,
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answer_concept_fully_specified_name.name AS answer_name
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FROM concept c
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INNER JOIN concept_datatype cd ON c.datatype_id = cd.concept_datatype_id
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INNER JOIN concept_name question_concept_name ON c.concept_id = question_concept_name.concept_id
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AND question_concept_name.concept_name_type = 'FULLY_SPECIFIED'
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AND
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question_concept_name.voided IS FALSE
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INNER JOIN global_property gp ON gp.property IN ('concept.true', 'concept.false')
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INNER JOIN concept_name answer_concept_fully_specified_name
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ON answer_concept_fully_specified_name.concept_id = gp.property_value
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AND answer_concept_fully_specified_name.concept_name_type = 'FULLY_SPECIFIED' AND
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answer_concept_fully_specified_name.voided IS FALSE
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WHERE question_concept_name.name = 'Diarrhoea,Type of Diarrhoea' AND cd.name = 'Boolean'
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ORDER BY answer_name DESC) first_answers
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INNER JOIN
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(SELECT
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ca.answer_concept AS answer,
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ifnull(answer_concept_short_name.name, answer_concept_fully_specified_name.name) AS answer_name
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FROM concept c
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INNER JOIN concept_datatype cd ON c.datatype_id = cd.concept_datatype_id
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INNER JOIN concept_name question_concept_name ON c.concept_id = question_concept_name.concept_id
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AND question_concept_name.concept_name_type = 'FULLY_SPECIFIED'
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AND
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question_concept_name.voided IS FALSE
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INNER JOIN concept_answer ca ON c.concept_id = ca.concept_id
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INNER JOIN concept_name answer_concept_fully_specified_name
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ON ca.answer_concept = answer_concept_fully_specified_name.concept_id
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AND answer_concept_fully_specified_name.concept_name_type = 'FULLY_SPECIFIED' AND
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answer_concept_fully_specified_name.voided IS FALSE
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LEFT JOIN concept_name answer_concept_short_name ON ca.answer_concept = answer_concept_short_name.concept_id
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AND answer_concept_short_name.concept_name_type = 'SHORT' AND
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answer_concept_short_name.voided IS FALSE
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WHERE question_concept_name.name = 'Diarrhoea, Symptoms of Diarrhoea' AND cd.name = 'Coded'
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UNION
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SELECT
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answer_concept_fully_specified_name.concept_id AS answer,
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answer_concept_fully_specified_name.name AS answer_name
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FROM concept c
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INNER JOIN concept_datatype cd ON c.datatype_id = cd.concept_datatype_id
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INNER JOIN concept_name question_concept_name ON c.concept_id = question_concept_name.concept_id
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AND question_concept_name.concept_name_type = 'FULLY_SPECIFIED'
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AND
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question_concept_name.voided IS FALSE
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INNER JOIN global_property gp ON gp.property IN ('concept.true', 'concept.false')
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INNER JOIN concept_name answer_concept_fully_specified_name
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ON answer_concept_fully_specified_name.concept_id = gp.property_value
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AND answer_concept_fully_specified_name.concept_name_type = 'FULLY_SPECIFIED' AND
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answer_concept_fully_specified_name.voided IS FALSE
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WHERE question_concept_name.name = 'Diarrhoea, Symptoms of Diarrhoea' AND cd.name = 'Boolean'
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ORDER BY answer_name DESC
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) second_answers
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INNER JOIN (SELECT 'M' AS gender
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UNION SELECT 'F' AS gender
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UNION SELECT 'O' AS gender) gender
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INNER JOIN reporting_age_group rag ON rag.report_group_name = 'Diarrhoea'
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LEFT OUTER JOIN (
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SELECT
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o1.person_id,
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cn2.concept_id AS answer,
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cn1.concept_id AS question,
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v1.visit_id AS visit_id,
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o1.obs_datetime AS datetime
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FROM obs o1
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INNER JOIN concept_name cn1
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ON o1.concept_id = cn1.concept_id AND
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cn1.concept_name_type = 'FULLY_SPECIFIED' AND cn1.name = 'Diarrhoea,Type of Diarrhoea'
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AND o1.voided = 0 AND cn1.voided = 0
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INNER JOIN concept_name cn2
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ON o1.value_coded = cn2.concept_id
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AND cn2.concept_name_type = 'FULLY_SPECIFIED'
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AND cn2.voided = 0
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INNER JOIN encounter e1
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ON o1.encounter_id = e1.encounter_id and
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cast(o1.obs_datetime AS DATE) BETWEEN '#startDate#' AND '#endDate#'
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INNER JOIN
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(SELECT DISTINCT location_id
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FROM location_tag_map INNER JOIN location_tag ON location_tag_map.location_tag_id = location_tag.location_tag_id
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AND location_tag.name IN ('Report Location')) locations ON locations.location_id = e1.location_id
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INNER JOIN visit v1
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ON v1.visit_id = e1.visit_id
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inner join visit_type vt1 on vt1.visit_type_id = v1.visit_type_id and vt1.name='outpatient'
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) first_concept
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ON first_concept.answer = first_answers.answer
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LEFT OUTER JOIN (
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SELECT
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o1.person_id,
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cn2.concept_id AS answer,
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cn1.concept_id AS question,
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v1.visit_id AS visit_id,
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o1.obs_datetime AS datetime
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FROM obs o1
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INNER JOIN concept_name cn1
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ON o1.concept_id = cn1.concept_id AND
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cn1.concept_name_type = 'FULLY_SPECIFIED' AND cn1.name = 'Diarrhoea, Symptoms of Diarrhoea'
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AND o1.voided = 0 AND cn1.voided = 0
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INNER JOIN concept_name cn2
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ON o1.value_coded = cn2.concept_id
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AND cn2.concept_name_type = 'FULLY_SPECIFIED'
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AND cn2.voided = 0
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INNER JOIN encounter e1
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ON o1.encounter_id = e1.encounter_id and
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cast(o1.obs_datetime AS DATE) BETWEEN '#startDate#' AND '#endDate#'
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INNER JOIN
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(SELECT DISTINCT location_id
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FROM location_tag_map INNER JOIN location_tag ON location_tag_map.location_tag_id = location_tag.location_tag_id
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AND location_tag.name IN ('Report Location')) locations ON locations.location_id = e1.location_id
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INNER JOIN visit v1
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ON v1.visit_id = e1.visit_id
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inner join visit_type vt1 on vt1.visit_type_id = v1.visit_type_id and vt1.name='outpatient'
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) second_concept
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ON second_concept.answer = second_answers.answer
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AND first_concept.person_id = second_concept.person_id
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AND first_concept.visit_id = second_concept.visit_id
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LEFT OUTER JOIN person p ON first_concept.person_id = p.person_id AND p.gender = gender.gender
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AND cast(first_concept.datetime AS DATE) BETWEEN (DATE_ADD(
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DATE_ADD(p.birthdate, INTERVAL rag.min_years YEAR), INTERVAL rag.min_days
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DAY)) AND (DATE_ADD(DATE_ADD(p.birthdate, INTERVAL rag.max_years YEAR), INTERVAL
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rag.max_days DAY))
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GROUP BY first_answers.answer_name, second_answers.answer_name, gender.gender, rag.name, rag.sort_order
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order by rag.name,first_answers.answer_name,second_answers.answer_name;
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